Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv5A0A0B4J1G9 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv5A0A0B4J1G9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv5A0A0B4J1G9 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv5A0A0B4J1G9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trbv5A0A0B4J1G9 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv5A0A0B4J1G9 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv5A0A0B4J1G9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv5A0A0B4J1G9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trbv5A0A0B4J1G9 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv5A0A0B4J1G9 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trbv5A0A0B4J1G9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv5A0A0B4J1G9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Trbv5A0A0B4J1G9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv5A0A0B4J1G9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv5A0A0B4J1G9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv5A0A0B4J1G9 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trbv5A0A0B4J1G9 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Particl-201ENSMUST00000205370 1560 ntBASIC18.25■□□□□ 0.51
Trbv5A0A0B4J1G9 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv5A0A0B4J1G9 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv5A0A0B4J1G9 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv5A0A0B4J1G9 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv5A0A0B4J1G9 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv5A0A0B4J1G9 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trbv5A0A0B4J1G9 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trbv5A0A0B4J1G9 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv5A0A0B4J1G9 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv5A0A0B4J1G9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv5A0A0B4J1G9 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trbv5A0A0B4J1G9 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.21■□□□□ 0.51
Trbv5A0A0B4J1G9 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv5A0A0B4J1G9 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Trbv5A0A0B4J1G9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv5A0A0B4J1G9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv5A0A0B4J1G9 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.5
Trbv5A0A0B4J1G9 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv5A0A0B4J1G9 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv5A0A0B4J1G9 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv5A0A0B4J1G9 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv5A0A0B4J1G9 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv5A0A0B4J1G9 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.2■□□□□ 0.5
Trbv5A0A0B4J1G9 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trbv5A0A0B4J1G9 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv5A0A0B4J1G9 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv5A0A0B4J1G9 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.19■□□□□ 0.5
Trbv5A0A0B4J1G9 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv5A0A0B4J1G9 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv5A0A0B4J1G9 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC18.19■□□□□ 0.5
Trbv5A0A0B4J1G9 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trbv5A0A0B4J1G9 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv5A0A0B4J1G9 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv5A0A0B4J1G9 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv5A0A0B4J1G9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv5A0A0B4J1G9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv5A0A0B4J1G9 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Trbv5A0A0B4J1G9 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv5A0A0B4J1G9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv5A0A0B4J1G9 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv5A0A0B4J1G9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv5A0A0B4J1G9 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv5A0A0B4J1G9 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Trbv5A0A0B4J1G9 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv5A0A0B4J1G9 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv5A0A0B4J1G9 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv5A0A0B4J1G9 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv5A0A0B4J1G9 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv5A0A0B4J1G9 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trbv5A0A0B4J1G9 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv5A0A0B4J1G9 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Trbv5A0A0B4J1G9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv5A0A0B4J1G9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trbv5A0A0B4J1G9 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv5A0A0B4J1G9 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv5A0A0B4J1G9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv5A0A0B4J1G9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv5A0A0B4J1G9 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv5A0A0B4J1G9 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Trbv5A0A0B4J1G9 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 14.4 ms