Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Trav4-4-dv10A0A075B651 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trav4-4-dv10A0A075B651 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
Trav4-4-dv10A0A075B651 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trav4-4-dv10A0A075B651 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Trav4-4-dv10A0A075B651 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trav4-4-dv10A0A075B651 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trav4-4-dv10A0A075B651 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trav4-4-dv10A0A075B651 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trav4-4-dv10A0A075B651 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trav4-4-dv10A0A075B651 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trav4-4-dv10A0A075B651 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-4-dv10A0A075B651 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-4-dv10A0A075B651 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trav4-4-dv10A0A075B651 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trav4-4-dv10A0A075B651 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-4-dv10A0A075B651 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trav4-4-dv10A0A075B651 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trav4-4-dv10A0A075B651 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trav4-4-dv10A0A075B651 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Trav4-4-dv10A0A075B651 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trav4-4-dv10A0A075B651 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trav4-4-dv10A0A075B651 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trav4-4-dv10A0A075B651 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Gm37136-201ENSMUST00000194368 194 ntBASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trav4-4-dv10A0A075B651 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-4-dv10A0A075B651 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-4-dv10A0A075B651 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trav4-4-dv10A0A075B651 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Trav4-4-dv10A0A075B651 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.5 ms