Protein–RNA interactions for Protein: Q9JJC9

Herpud2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herpud2Q9JJC9 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Herpud2Q9JJC9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Herpud2Q9JJC9 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.28■■□□□ 1.32
Herpud2Q9JJC9 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC23.28■■□□□ 1.32
Herpud2Q9JJC9 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Herpud2Q9JJC9 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC23.27■■□□□ 1.32
Herpud2Q9JJC9 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.31
Herpud2Q9JJC9 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.26■■□□□ 1.31
Herpud2Q9JJC9 Gm14523-201ENSMUST00000117260 558 ntBASIC23.26■■□□□ 1.31
Herpud2Q9JJC9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Herpud2Q9JJC9 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Herpud2Q9JJC9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Herpud2Q9JJC9 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Herpud2Q9JJC9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Herpud2Q9JJC9 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.24■■□□□ 1.31
Herpud2Q9JJC9 Terc-201ENSMUST00000082862 423 ntBASIC23.24■■□□□ 1.31
Herpud2Q9JJC9 Amer2-203ENSMUST00000225247 2662 ntBASIC23.24■■□□□ 1.31
Herpud2Q9JJC9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Herpud2Q9JJC9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC23.23■■□□□ 1.31
Herpud2Q9JJC9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Herpud2Q9JJC9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Herpud2Q9JJC9 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.22■■□□□ 1.31
Herpud2Q9JJC9 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC23.22■■□□□ 1.31
Herpud2Q9JJC9 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Herpud2Q9JJC9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Herpud2Q9JJC9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.21■■□□□ 1.31
Herpud2Q9JJC9 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC23.21■■□□□ 1.31
Herpud2Q9JJC9 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Herpud2Q9JJC9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Herpud2Q9JJC9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Herpud2Q9JJC9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Herpud2Q9JJC9 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Herpud2Q9JJC9 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.2■■□□□ 1.3
Herpud2Q9JJC9 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Herpud2Q9JJC9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Herpud2Q9JJC9 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.2■■□□□ 1.3
Herpud2Q9JJC9 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Herpud2Q9JJC9 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Herpud2Q9JJC9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Herpud2Q9JJC9 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
Herpud2Q9JJC9 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Herpud2Q9JJC9 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Herpud2Q9JJC9 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Herpud2Q9JJC9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Herpud2Q9JJC9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Herpud2Q9JJC9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Herpud2Q9JJC9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Herpud2Q9JJC9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
Herpud2Q9JJC9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC23.15■■□□□ 1.3
Herpud2Q9JJC9 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Herpud2Q9JJC9 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Herpud2Q9JJC9 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Herpud2Q9JJC9 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.13■■□□□ 1.29
Herpud2Q9JJC9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Herpud2Q9JJC9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.12■■□□□ 1.29
Herpud2Q9JJC9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Herpud2Q9JJC9 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Herpud2Q9JJC9 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC23.11■■□□□ 1.29
Herpud2Q9JJC9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Herpud2Q9JJC9 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Herpud2Q9JJC9 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Herpud2Q9JJC9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Herpud2Q9JJC9 AC151971.4-201ENSMUST00000214717 704 ntBASIC23.09■■□□□ 1.29
Herpud2Q9JJC9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Herpud2Q9JJC9 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Herpud2Q9JJC9 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.08■■□□□ 1.29
Herpud2Q9JJC9 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Herpud2Q9JJC9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.08■■□□□ 1.29
Herpud2Q9JJC9 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.08■■□□□ 1.29
Herpud2Q9JJC9 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Herpud2Q9JJC9 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Herpud2Q9JJC9 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Herpud2Q9JJC9 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Herpud2Q9JJC9 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.06■■□□□ 1.28
Herpud2Q9JJC9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.06■■□□□ 1.28
Herpud2Q9JJC9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Herpud2Q9JJC9 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Herpud2Q9JJC9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Herpud2Q9JJC9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Herpud2Q9JJC9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.04■■□□□ 1.28
Herpud2Q9JJC9 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Herpud2Q9JJC9 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Herpud2Q9JJC9 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Herpud2Q9JJC9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Herpud2Q9JJC9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Herpud2Q9JJC9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.03■■□□□ 1.28
Herpud2Q9JJC9 Gm10420-201ENSMUST00000121713 882 ntBASIC23.03■■□□□ 1.28
Herpud2Q9JJC9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
Herpud2Q9JJC9 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Herpud2Q9JJC9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Herpud2Q9JJC9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms