Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nkd2Q8VE28 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.75■□□□□ 0.91
Nkd2Q8VE28 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nkd2Q8VE28 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Nkd2Q8VE28 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.74■□□□□ 0.91
Nkd2Q8VE28 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Nkd2Q8VE28 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Nkd2Q8VE28 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkd2Q8VE28 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nkd2Q8VE28 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nkd2Q8VE28 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkd2Q8VE28 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkd2Q8VE28 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Nkd2Q8VE28 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nkd2Q8VE28 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Nkd2Q8VE28 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Nkd2Q8VE28 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkd2Q8VE28 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nkd2Q8VE28 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkd2Q8VE28 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Nkd2Q8VE28 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.69■□□□□ 0.9
Nkd2Q8VE28 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Nkd2Q8VE28 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.67■□□□□ 0.9
Nkd2Q8VE28 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd2Q8VE28 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd2Q8VE28 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nkd2Q8VE28 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nkd2Q8VE28 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Nkd2Q8VE28 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nkd2Q8VE28 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkd2Q8VE28 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkd2Q8VE28 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.65■□□□□ 0.9
Nkd2Q8VE28 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Nkd2Q8VE28 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Nkd2Q8VE28 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Nkd2Q8VE28 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Nkd2Q8VE28 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nkd2Q8VE28 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Il17rd-202ENSMUST00000223942 2186 ntBASIC20.63■□□□□ 0.89
Nkd2Q8VE28 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Nkd2Q8VE28 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
Nkd2Q8VE28 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd2Q8VE28 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd2Q8VE28 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd2Q8VE28 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.61■□□□□ 0.89
Nkd2Q8VE28 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd2Q8VE28 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nkd2Q8VE28 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkd2Q8VE28 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nkd2Q8VE28 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Nkd2Q8VE28 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Nkd2Q8VE28 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.59■□□□□ 0.89
Nkd2Q8VE28 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Nkd2Q8VE28 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkd2Q8VE28 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkd2Q8VE28 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Nkd2Q8VE28 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkd2Q8VE28 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkd2Q8VE28 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkd2Q8VE28 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Nkd2Q8VE28 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Nkd2Q8VE28 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkd2Q8VE28 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nkd2Q8VE28 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkd2Q8VE28 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkd2Q8VE28 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Nkd2Q8VE28 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Nkd2Q8VE28 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms