Protein–RNA interactions for Protein: Q8BX39

Cphx2, Cytoplasmic polyadenylated homeobox, mousemouse

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cphx2Q8BX39 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cphx2Q8BX39 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cphx2Q8BX39 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cphx2Q8BX39 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cphx2Q8BX39 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cphx2Q8BX39 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cphx2Q8BX39 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cphx2Q8BX39 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cphx2Q8BX39 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cphx2Q8BX39 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cphx2Q8BX39 Notumos-201ENSMUST00000151998 2659 ntBASIC17.33■□□□□ 0.36
Cphx2Q8BX39 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cphx2Q8BX39 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Gm45855-201ENSMUST00000212546 880 ntBASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cphx2Q8BX39 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cphx2Q8BX39 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Cphx2Q8BX39 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cphx2Q8BX39 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cphx2Q8BX39 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Cphx2Q8BX39 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.3■□□□□ 0.36
Cphx2Q8BX39 Gm9397-201ENSMUST00000200125 605 ntBASIC17.3■□□□□ 0.36
Cphx2Q8BX39 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cphx2Q8BX39 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Cphx2Q8BX39 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Cphx2Q8BX39 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cphx2Q8BX39 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Cphx2Q8BX39 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cphx2Q8BX39 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Cphx2Q8BX39 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC17.29■□□□□ 0.36
Cphx2Q8BX39 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Cphx2Q8BX39 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cphx2Q8BX39 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cphx2Q8BX39 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cphx2Q8BX39 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Cphx2Q8BX39 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Cphx2Q8BX39 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cphx2Q8BX39 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Cphx2Q8BX39 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
Cphx2Q8BX39 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cphx2Q8BX39 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Cphx2Q8BX39 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Cphx2Q8BX39 Gm43863-201ENSMUST00000203822 1192 ntBASIC17.26■□□□□ 0.35
Cphx2Q8BX39 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC17.26■□□□□ 0.35
Cphx2Q8BX39 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Cphx2Q8BX39 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Cphx2Q8BX39 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Cphx2Q8BX39 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC17.25■□□□□ 0.35
Cphx2Q8BX39 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
Cphx2Q8BX39 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cphx2Q8BX39 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Cphx2Q8BX39 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cphx2Q8BX39 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cphx2Q8BX39 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Cphx2Q8BX39 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cphx2Q8BX39 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cphx2Q8BX39 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cphx2Q8BX39 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cphx2Q8BX39 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Cphx2Q8BX39 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Cphx2Q8BX39 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Cphx2Q8BX39 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Cphx2Q8BX39 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Cphx2Q8BX39 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cphx2Q8BX39 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cphx2Q8BX39 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Cphx2Q8BX39 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cphx2Q8BX39 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Cphx2Q8BX39 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cphx2Q8BX39 Gm24970-201ENSMUST00000175582 82 ntBASIC17.21■□□□□ 0.35
Cphx2Q8BX39 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cphx2Q8BX39 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cphx2Q8BX39 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cphx2Q8BX39 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cphx2Q8BX39 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cphx2Q8BX39 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cphx2Q8BX39 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cphx2Q8BX39 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC17.19■□□□□ 0.34
Cphx2Q8BX39 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cphx2Q8BX39 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cphx2Q8BX39 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
Cphx2Q8BX39 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Cphx2Q8BX39 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
Cphx2Q8BX39 AC157572.2-201ENSMUST00000226970 908 ntBASIC17.18■□□□□ 0.34
Cphx2Q8BX39 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.18■□□□□ 0.34
Cphx2Q8BX39 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cphx2Q8BX39 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cphx2Q8BX39 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Cphx2Q8BX39 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cphx2Q8BX39 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cphx2Q8BX39 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC17.17■□□□□ 0.34
Cphx2Q8BX39 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cphx2Q8BX39 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 311.5 ms