Protein–RNA interactions for Protein: Q80YV2

Zc3hc1, Nuclear-interacting partner of ALK, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3hc1Q80YV2 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Zc3hc1Q80YV2 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zc3hc1Q80YV2 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Zc3hc1Q80YV2 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zc3hc1Q80YV2 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Zc3hc1Q80YV2 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Zc3hc1Q80YV2 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC20.93■□□□□ 0.94
Zc3hc1Q80YV2 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Zc3hc1Q80YV2 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Zc3hc1Q80YV2 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Zc3hc1Q80YV2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Zc3hc1Q80YV2 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Zc3hc1Q80YV2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Zc3hc1Q80YV2 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zc3hc1Q80YV2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zc3hc1Q80YV2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Zc3hc1Q80YV2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Zc3hc1Q80YV2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Zc3hc1Q80YV2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zc3hc1Q80YV2 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zc3hc1Q80YV2 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Zc3hc1Q80YV2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zc3hc1Q80YV2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zc3hc1Q80YV2 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.89■□□□□ 0.93
Zc3hc1Q80YV2 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Zc3hc1Q80YV2 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Zc3hc1Q80YV2 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Zc3hc1Q80YV2 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Zc3hc1Q80YV2 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.88■□□□□ 0.93
Zc3hc1Q80YV2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Zc3hc1Q80YV2 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Zc3hc1Q80YV2 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zc3hc1Q80YV2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zc3hc1Q80YV2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zc3hc1Q80YV2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Zc3hc1Q80YV2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Zc3hc1Q80YV2 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Zc3hc1Q80YV2 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.86■□□□□ 0.93
Zc3hc1Q80YV2 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.86■□□□□ 0.93
Zc3hc1Q80YV2 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Zc3hc1Q80YV2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3hc1Q80YV2 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.85■□□□□ 0.93
Zc3hc1Q80YV2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Zc3hc1Q80YV2 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3hc1Q80YV2 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Zc3hc1Q80YV2 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Zc3hc1Q80YV2 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Zc3hc1Q80YV2 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Zc3hc1Q80YV2 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Zc3hc1Q80YV2 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.84■□□□□ 0.93
Zc3hc1Q80YV2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Zc3hc1Q80YV2 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zc3hc1Q80YV2 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.83■□□□□ 0.93
Zc3hc1Q80YV2 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Zc3hc1Q80YV2 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.83■□□□□ 0.92
Zc3hc1Q80YV2 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.82■□□□□ 0.92
Zc3hc1Q80YV2 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3hc1Q80YV2 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3hc1Q80YV2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3hc1Q80YV2 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zc3hc1Q80YV2 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3hc1Q80YV2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Zc3hc1Q80YV2 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Zc3hc1Q80YV2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Zc3hc1Q80YV2 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3hc1Q80YV2 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zc3hc1Q80YV2 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.79■□□□□ 0.92
Zc3hc1Q80YV2 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zc3hc1Q80YV2 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Zc3hc1Q80YV2 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.78■□□□□ 0.92
Zc3hc1Q80YV2 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3hc1Q80YV2 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3hc1Q80YV2 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3hc1Q80YV2 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3hc1Q80YV2 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3hc1Q80YV2 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Zc3hc1Q80YV2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zc3hc1Q80YV2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Zc3hc1Q80YV2 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zc3hc1Q80YV2 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zc3hc1Q80YV2 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Zc3hc1Q80YV2 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zc3hc1Q80YV2 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zc3hc1Q80YV2 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zc3hc1Q80YV2 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Zc3hc1Q80YV2 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zc3hc1Q80YV2 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zc3hc1Q80YV2 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Zc3hc1Q80YV2 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zc3hc1Q80YV2 Gm45855-201ENSMUST00000212546 880 ntBASIC20.75■□□□□ 0.91
Zc3hc1Q80YV2 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Zc3hc1Q80YV2 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Zc3hc1Q80YV2 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms