Protein–RNA interactions for Protein: P32958

Rom1, Rod outer segment membrane protein 1, mousemouse

Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rom1P32958 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Rom1P32958 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rom1P32958 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rom1P32958 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rom1P32958 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Rom1P32958 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Rom1P32958 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.18■□□□□ 0.5
Rom1P32958 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rom1P32958 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Rom1P32958 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.17■□□□□ 0.5
Rom1P32958 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC18.17■□□□□ 0.5
Rom1P32958 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.17■□□□□ 0.5
Rom1P32958 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Rom1P32958 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rom1P32958 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.16■□□□□ 0.5
Rom1P32958 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rom1P32958 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rom1P32958 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rom1P32958 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Rom1P32958 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Rom1P32958 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Rom1P32958 Gm8109-201ENSMUST00000194076 746 ntBASIC18.15■□□□□ 0.5
Rom1P32958 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rom1P32958 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Rom1P32958 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Rom1P32958 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Rom1P32958 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Rom1P32958 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Rom1P32958 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Rom1P32958 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rom1P32958 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rom1P32958 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Rom1P32958 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Rom1P32958 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Rom1P32958 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Rom1P32958 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Rom1P32958 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Rom1P32958 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rom1P32958 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Rom1P32958 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rom1P32958 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.11■□□□□ 0.49
Rom1P32958 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Rom1P32958 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rom1P32958 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Rom1P32958 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rom1P32958 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rom1P32958 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rom1P32958 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Rom1P32958 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Rom1P32958 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rom1P32958 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Rom1P32958 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.09■□□□□ 0.49
Rom1P32958 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rom1P32958 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rom1P32958 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Rom1P32958 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
Rom1P32958 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Rom1P32958 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Rom1P32958 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.08■□□□□ 0.48
Rom1P32958 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rom1P32958 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rom1P32958 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rom1P32958 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rom1P32958 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rom1P32958 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rom1P32958 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rom1P32958 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rom1P32958 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rom1P32958 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rom1P32958 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rom1P32958 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rom1P32958 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Rom1P32958 Gm24804-201ENSMUST00000174982 85 ntBASIC18.05■□□□□ 0.48
Rom1P32958 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rom1P32958 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.05■□□□□ 0.48
Rom1P32958 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rom1P32958 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rom1P32958 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rom1P32958 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rom1P32958 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rom1P32958 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Rom1P32958 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rom1P32958 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rom1P32958 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rom1P32958 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rom1P32958 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rom1P32958 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rom1P32958 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.02■□□□□ 0.48
Rom1P32958 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rom1P32958 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rom1P32958 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rom1P32958 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rom1P32958 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rom1P32958 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rom1P32958 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rom1P32958 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rom1P32958 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rom1P32958 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rom1P32958 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rom1P32958 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms