Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.73■□□□□ 0.91
Rnf13O54965 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf13O54965 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf13O54965 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf13O54965 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Rnf13O54965 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf13O54965 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf13O54965 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf13O54965 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Rnf13O54965 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf13O54965 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf13O54965 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Rnf13O54965 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Rnf13O54965 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Rnf13O54965 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf13O54965 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf13O54965 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Rnf13O54965 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf13O54965 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf13O54965 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Rnf13O54965 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf13O54965 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rnf13O54965 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.68■□□□□ 0.9
Rnf13O54965 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf13O54965 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf13O54965 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rnf13O54965 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Rnf13O54965 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf13O54965 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rnf13O54965 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rnf13O54965 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.67■□□□□ 0.9
Rnf13O54965 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf13O54965 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC20.66■□□□□ 0.9
Rnf13O54965 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf13O54965 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
Rnf13O54965 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf13O54965 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf13O54965 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rnf13O54965 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf13O54965 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rnf13O54965 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf13O54965 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Rnf13O54965 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rnf13O54965 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.64■□□□□ 0.9
Rnf13O54965 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Rnf13O54965 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf13O54965 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC20.64■□□□□ 0.89
Rnf13O54965 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf13O54965 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf13O54965 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf13O54965 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rnf13O54965 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rnf13O54965 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf13O54965 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf13O54965 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf13O54965 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rnf13O54965 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rnf13O54965 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rnf13O54965 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf13O54965 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf13O54965 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf13O54965 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rnf13O54965 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf13O54965 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf13O54965 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Rnf13O54965 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf13O54965 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.6■□□□□ 0.89
Rnf13O54965 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf13O54965 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rnf13O54965 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rnf13O54965 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf13O54965 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf13O54965 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rnf13O54965 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.59■□□□□ 0.89
Rnf13O54965 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rnf13O54965 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf13O54965 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rnf13O54965 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf13O54965 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rnf13O54965 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rnf13O54965 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.57■□□□□ 0.88
Rnf13O54965 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.57■□□□□ 0.88
Rnf13O54965 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf13O54965 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf13O54965 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rnf13O54965 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf13O54965 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf13O54965 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf13O54965 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rnf13O54965 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf13O54965 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Rnf13O54965 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rnf13O54965 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Rnf13O54965 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf13O54965 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf13O54965 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf13O54965 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf13O54965 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Rnf13O54965 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Rnf13O54965 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 97.1 ms