Protein–RNA interactions for Protein: A0A1B0GSB3

Gm3880, Predicted pseudogene 3880, mousemouse

Predictions only

Length 72 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3880A0A1B0GSB3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Gm3880A0A1B0GSB3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3880A0A1B0GSB3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3880A0A1B0GSB3 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Gm3880A0A1B0GSB3 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Gm3880A0A1B0GSB3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Gm3880A0A1B0GSB3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3880A0A1B0GSB3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC11.55□□□□□ -0.56
Gm3880A0A1B0GSB3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC11.55□□□□□ -0.56
Gm3880A0A1B0GSB3 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3880A0A1B0GSB3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3880A0A1B0GSB3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Gm3880A0A1B0GSB3 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Gm3880A0A1B0GSB3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Gm3880A0A1B0GSB3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3880A0A1B0GSB3 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Gm3880A0A1B0GSB3 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC11.53□□□□□ -0.56
Gm3880A0A1B0GSB3 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3880A0A1B0GSB3 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Gm3880A0A1B0GSB3 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Gm3880A0A1B0GSB3 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC11.53□□□□□ -0.56
Gm3880A0A1B0GSB3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3880A0A1B0GSB3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3880A0A1B0GSB3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Gm3880A0A1B0GSB3 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Gm3880A0A1B0GSB3 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC11.52□□□□□ -0.57
Gm3880A0A1B0GSB3 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm3880A0A1B0GSB3 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm3880A0A1B0GSB3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm3880A0A1B0GSB3 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm3880A0A1B0GSB3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Gm3880A0A1B0GSB3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Gm3880A0A1B0GSB3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3880A0A1B0GSB3 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3880A0A1B0GSB3 Gm6345-201ENSMUST00000180378 1691 ntBASIC11.5□□□□□ -0.57
Gm3880A0A1B0GSB3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3880A0A1B0GSB3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3880A0A1B0GSB3 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3880A0A1B0GSB3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Gm3880A0A1B0GSB3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3880A0A1B0GSB3 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3880A0A1B0GSB3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Gm3880A0A1B0GSB3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Gm3880A0A1B0GSB3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC11.49□□□□□ -0.57
Gm3880A0A1B0GSB3 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3880A0A1B0GSB3 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3880A0A1B0GSB3 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3880A0A1B0GSB3 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3880A0A1B0GSB3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC11.48□□□□□ -0.57
Gm3880A0A1B0GSB3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
Gm3880A0A1B0GSB3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Gm3880A0A1B0GSB3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3880A0A1B0GSB3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Gm3880A0A1B0GSB3 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3880A0A1B0GSB3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3880A0A1B0GSB3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Gm3880A0A1B0GSB3 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Gm3880A0A1B0GSB3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Gm3880A0A1B0GSB3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3880A0A1B0GSB3 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3880A0A1B0GSB3 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3880A0A1B0GSB3 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC11.46□□□□□ -0.57
Gm3880A0A1B0GSB3 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3880A0A1B0GSB3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3880A0A1B0GSB3 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Gm3880A0A1B0GSB3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC11.46□□□□□ -0.58
Gm3880A0A1B0GSB3 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Gm3880A0A1B0GSB3 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Gm3880A0A1B0GSB3 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Gm3880A0A1B0GSB3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3880A0A1B0GSB3 Gm38160-201ENSMUST00000193090 2499 ntBASIC11.44□□□□□ -0.58
Gm3880A0A1B0GSB3 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3880A0A1B0GSB3 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3880A0A1B0GSB3 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Gm3880A0A1B0GSB3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Notumos-201ENSMUST00000151998 2659 ntBASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Gm3880A0A1B0GSB3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms