Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-47A0A0A6YY41 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Ighv1-47A0A0A6YY41 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-47A0A0A6YY41 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-47A0A0A6YY41 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Ighv1-47A0A0A6YY41 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.93■□□□□ 0.62
Ighv1-47A0A0A6YY41 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-47A0A0A6YY41 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Ighv1-47A0A0A6YY41 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Ighv1-47A0A0A6YY41 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-47A0A0A6YY41 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Ighv1-47A0A0A6YY41 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC18.91■□□□□ 0.62
Ighv1-47A0A0A6YY41 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-47A0A0A6YY41 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Ighv1-47A0A0A6YY41 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-47A0A0A6YY41 Gm6821-201ENSMUST00000107540 542 ntBASIC18.9■□□□□ 0.62
Ighv1-47A0A0A6YY41 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Ighv1-47A0A0A6YY41 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Ighv1-47A0A0A6YY41 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.88■□□□□ 0.61
Ighv1-47A0A0A6YY41 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-47A0A0A6YY41 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-47A0A0A6YY41 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Ighv1-47A0A0A6YY41 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.87■□□□□ 0.61
Ighv1-47A0A0A6YY41 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.87■□□□□ 0.61
Ighv1-47A0A0A6YY41 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-47A0A0A6YY41 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-47A0A0A6YY41 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Ighv1-47A0A0A6YY41 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Ighv1-47A0A0A6YY41 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-47A0A0A6YY41 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-47A0A0A6YY41 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.85■□□□□ 0.61
Ighv1-47A0A0A6YY41 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.85■□□□□ 0.61
Ighv1-47A0A0A6YY41 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Ighv1-47A0A0A6YY41 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.84■□□□□ 0.61
Ighv1-47A0A0A6YY41 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.84■□□□□ 0.61
Ighv1-47A0A0A6YY41 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ighv1-47A0A0A6YY41 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-47A0A0A6YY41 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Ighv1-47A0A0A6YY41 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ighv1-47A0A0A6YY41 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.83■□□□□ 0.61
Ighv1-47A0A0A6YY41 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ighv1-47A0A0A6YY41 Particl-201ENSMUST00000205370 1560 ntBASIC18.83■□□□□ 0.6
Ighv1-47A0A0A6YY41 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-47A0A0A6YY41 Gm8503-201ENSMUST00000118131 455 ntBASIC18.82■□□□□ 0.6
Ighv1-47A0A0A6YY41 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ighv1-47A0A0A6YY41 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ighv1-47A0A0A6YY41 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.81■□□□□ 0.6
Ighv1-47A0A0A6YY41 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ighv1-47A0A0A6YY41 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ighv1-47A0A0A6YY41 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-47A0A0A6YY41 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-47A0A0A6YY41 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-47A0A0A6YY41 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ighv1-47A0A0A6YY41 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Ighv1-47A0A0A6YY41 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ighv1-47A0A0A6YY41 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-47A0A0A6YY41 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-47A0A0A6YY41 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-47A0A0A6YY41 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ighv1-47A0A0A6YY41 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-47A0A0A6YY41 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-47A0A0A6YY41 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.78■□□□□ 0.6
Ighv1-47A0A0A6YY41 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-47A0A0A6YY41 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ighv1-47A0A0A6YY41 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-47A0A0A6YY41 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-47A0A0A6YY41 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ighv1-47A0A0A6YY41 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.77■□□□□ 0.59
Ighv1-47A0A0A6YY41 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-47A0A0A6YY41 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-47A0A0A6YY41 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-47A0A0A6YY41 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC18.76■□□□□ 0.59
Ighv1-47A0A0A6YY41 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ighv1-47A0A0A6YY41 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ighv1-47A0A0A6YY41 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-47A0A0A6YY41 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ighv1-47A0A0A6YY41 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ighv1-47A0A0A6YY41 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ighv1-47A0A0A6YY41 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-47A0A0A6YY41 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-47A0A0A6YY41 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ighv1-47A0A0A6YY41 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Ighv1-47A0A0A6YY41 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Ighv1-47A0A0A6YY41 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Ighv1-47A0A0A6YY41 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms