RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 TIMM50Q3ZCQ8 353 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 ZSCAN4Q8NAM6 433 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF398Q8TD17 642 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 NXPE2Q96DL1 559 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 PADI3Q9ULW8 664 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 CEMIPQ8WUJ3 1361 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 REM1O75628 298 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 LRIG2O94898 1065 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 TGFB1P01137 390 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 C1QTNF8P60827 252 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 BMT2Q1RMZ1 405 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 DCST1Q5T197 706 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 LGR4Q9BXB1 951 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 CARS2Q9HA77 564 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 MAPRE3Q9UPY8 281 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 SPATA31C2B4DYI2 1134 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 CDK10Q15131 360 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 VWA5B1Q5TIE3 1220 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 LAS2Q8IYD9 372 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 PLA2G15Q8NCC3 412 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 PIWIL2Q8TC59 973 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 MR1Q95460 341 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 A0A0J9YYE9 177 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 ISPDA4D126 451 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 ADAP00813 363 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 MATKP42679 507 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 FOLH1Q04609 750 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 VPS26BQ4G0F5 336 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 ANXA8L1Q5VT79 327 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 TM9SF2Q99805 663 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 RIOK2Q9BVS4 552 aaKnown RBP16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF541Q9H0D2 1346 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 XIAPP98170 497 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 BST1Q10588 318 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 ADGRE1Q14246 886 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 NXNL1Q96CM4 212 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 MCCC1Q96RQ3 725 aaPredicted RBP16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 TRPV4Q9HBA0 871 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 KCNMB3Q9NPA1 279 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 SLCO1B3Q9NPD5 702 aa16.7■□□□□ 0.26
CACNA1A-253ENST00000637927 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 A0A1W2PPK0 400 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 RENP00797 406 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 KCNJ2P63252 427 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 GALNT18Q6P9A2 607 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 CASTOR1Q8WTX7 329 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 OR2AG1Q9H205 316 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 ZDHHC4Q9NPG8 344 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 BAIAP2Q9UQB8 552 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 GNAO1P09471 354 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 FNTBP49356 437 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 CLRN1P58418 232 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 SNX29P2Q8IUI4 249 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 SFRP1Q8N474 314 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 PPTC7Q8NI37 304 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 HEXDCQ8WVB3 486 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 GATAD2BQ8WXI9 593 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 ALPK1Q96QP1 1244 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 FBRSL1Q9HCM7 1045 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 SNX7Q9UNH6 387 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 CORO2BQ9UQ03 480 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 C9J4A7 227 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 ALPIP09923 528 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 NR2F6P10588 404 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 ELF3P78545 371 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 GTF2BQ00403 316 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 QSOX2Q6ZRP7 698 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 AMER2Q8N7J2 671 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 YIPF7Q8N8F6 280 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 ZNF184Q99676 751 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 SSX3Q99909 188 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 CDH19Q9H159 772 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 PEX12O00623 359 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 SLC22A3O75751 556 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 SLC35G6P0C7Q6 338 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 CREB5Q02930 508 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 EXOC3L2Q2M3D2 409 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 B3GNT6Q6ZMB0 384 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 MTERF1Q99551 399 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 NPLQ9BXD5 320 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 TTYH1Q9H313 450 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 RPH3ALQ9UNE2 315 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 M0R2N6 131 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 CD48P09326 243 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 IGFBP5P24593 272 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 FSTL5Q8N475 847 aaPredicted RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 SLC39A8Q9C0K1 460 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 KCTD5Q9NXV2 234 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 HBS1LQ9Y450 684 aaKnown RBP16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 GRIN2DO15399 1336 aa16.69■□□□□ 0.26
CACNA1A-253ENST00000637927 PDCD5O14737 125 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 ENTPD5O75356 428 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 PGLSO95336 258 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 ANXA4P09525 319 aaPredicted RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 TARDBPQ13148 414 aaKnown RBP eCLIP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 OR8K5Q8NH50 307 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 AENQ8WTP8 325 aaKnown RBP16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 STK32AQ8WU08 396 aa16.68■□□□□ 0.26
CACNA1A-253ENST00000637927 KLHL15Q96M94 604 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms