RNA–Protein interactions for RNA: ENST00000619555.4

TARDBP-221, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-221ENST00000619555 MROH6A6NGR9 719 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 BHMG1C9JSJ3 638 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 H3BMH7 237 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 LIN7AO14910 233 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 ZNF189O75820 626 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 SORBS2O94875 1100 aaKnown RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 AP2A1O95782 977 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 IFNB1P01574 187 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 CHRM5P08912 532 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 GSTM1P09488 218 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 PSMA3P25788 255 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 MSNP26038 577 aaKnown RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 OTX2P32243 289 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 NSG1P42857 185 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 GABRA4P48169 554 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 GSTM4Q03013 218 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 RAPSNQ13702 412 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 ITIH4Q14624 930 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 INPP5JQ15735 1006 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 DEFB110Q30KQ9 67 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 P3H1Q32P28 736 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 PRR30Q53SZ7 412 aaPredicted RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 C1orf189Q5VU69 101 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 MLIPQ5VWP3 458 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 HIST2H2BCQ6DN03 193 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 HOOK3Q86VS8 718 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 RBMXL3Q8N7X1 1067 aaKnown RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 C19orf47Q8N9M1 422 aaKnown RBP10.78□□□□□ -0.68
TARDBP-221ENST00000619555 OR52K1Q8NGK4 314 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 FLVCR1-AS1Q8TAF5 88 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 ACTRT1Q8TDG2 376 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 ZKSCAN5Q9Y2L8 839 aa10.78□□□□□ -0.68
TARDBP-221ENST00000619555 SLC5A10A0PJK1 596 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 C9J4A7 227 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 PGRMC1O00264 195 aaKnown RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 CES2O00748 559 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 PSMD3O43242 534 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 OR1I1O60431 355 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 KLF7O75840 302 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 OR2B3O76000 313 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 HBQ1P09105 142 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 AGXTP21549 392 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 STIP1P31948 543 aaKnown RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 FOXN2P32314 431 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 SHMT2P34897 504 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 RPL22P35268 128 aaKnown RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 CSE1LP55060 971 aaKnown RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 FOXL2P58012 376 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 CYP1B1Q16678 543 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 FHL5Q5TD97 284 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 JMJD6Q6NYC1 403 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 MED25Q71SY5 747 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 RAB43Q86YS6 212 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 TMEM151BQ8IW70 566 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 FAM20CQ8IXL6 584 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 TBC1D21Q8IYX1 336 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 GPR135Q8IZ08 494 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 TMEM102Q8N9M5 508 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 Q8NA96 180 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 MAIP1Q8WWC4 291 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 N4BP2L2Q92802 583 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.77□□□□□ -0.697e-6■■■■■ 27.5
TARDBP-221ENST00000619555 TCTN2Q96GX1 697 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 NAPGQ99747 312 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 DPH2Q9BQC3 489 aaPredicted RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 ETNK1Q9HBU6 452 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 LRRC4CQ9HCJ2 640 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 SLC2A6Q9UGQ3 507 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 DRG1Q9Y295 367 aaKnown RBP10.77□□□□□ -0.69
TARDBP-221ENST00000619555 PCDHGB7Q9Y5F8 929 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 CACNA1DQ01668 2161 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 DOCK10Q96BY6 2186 aa10.77□□□□□ -0.69
TARDBP-221ENST00000619555 SVILO95425 2214 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 DOPEY1Q5JWR5 2465 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 POLEQ07864 2286 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 A0A0J9YY10 115 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 ISM1B1AKI9 464 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 MASP2O00187 686 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 DPM1O60762 260 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 CNOT3O75175 753 aaKnown RBP10.76□□□□□ -0.69
TARDBP-221ENST00000619555 AGFG2O95081 481 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 FTH1P02794 183 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 TCP1P17987 556 aaKnown RBP10.76□□□□□ -0.69
TARDBP-221ENST00000619555 PEBP1P30086 187 aaKnown RBP10.76□□□□□ -0.69
TARDBP-221ENST00000619555 GRIA1P42261 906 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 RRADP55042 308 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 SLC9A5Q14940 896 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 SYTL3Q4VX76 610 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 SLC6A19Q695T7 634 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 PACS1Q6VY07 963 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 MRGPREQ86SM8 312 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 LINC00523Q86TU6 105 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 CREG2Q8IUH2 290 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 DNAJC22Q8N4W6 341 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 ZNF655Q8N720 491 aaPredicted RBP10.76□□□□□ -0.69
TARDBP-221ENST00000619555 LMNTD1Q8N9Z9 388 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 OR13J1Q8NGT2 312 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 OR5K2Q8NHB8 316 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 HDAC10Q969S8 669 aa10.76□□□□□ -0.69
TARDBP-221ENST00000619555 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms