RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 KPNA2P52292 529 aaKnown RBP12.59□□□□□ -0.39
CLK3-224ENST00000568605 SLC7A5Q01650 507 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 GUCY2DQ02846 1103 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 PDAP1Q13442 181 aaKnown RBP12.59□□□□□ -0.39
CLK3-224ENST00000568605 IL11RAQ14626 422 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 KIR2DS3Q14952 304 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 KYNUQ16719 465 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 KLHL38Q2WGJ6 581 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 TEDDM1Q5T9Z0 273 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 TRMT10BQ6PF06 316 aaKnown RBP12.59□□□□□ -0.39
CLK3-224ENST00000568605 SPESP1Q6UW49 350 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 CAPN12Q6ZSI9 719 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 BPHLQ86WA6 291 aaPredicted RBP12.59□□□□□ -0.39
CLK3-224ENST00000568605 GPATCH11Q8N954 259 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 CD200R1Q8TD46 325 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 SEC14L1Q92503 715 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 NDNQ99608 321 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 SYTL2Q9HCH5 934 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 PDE7BQ9NP56 450 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 ACTR10Q9NZ32 417 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 SPATA7Q9P0W8 599 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 LNPEPQ9UIQ6 1025 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 TSR3Q9UJK0 312 aaKnown RBP12.59□□□□□ -0.39
CLK3-224ENST00000568605 BTRCQ9Y297 605 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 DHRS7Q9Y394 339 aa12.59□□□□□ -0.39
CLK3-224ENST00000568605 FER1L5A0AVI2 2057 aa12.58□□□□□ -0.39
CLK3-224ENST00000568605 IGHV5-51A0A0C4DH38 117 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 ESYT3A0FGR9 886 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 ISM1B1AKI9 464 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 BTN3A3O00478 584 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 KIF1CO43896 1103 aaKnown RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 FKBP9O95302 570 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 MATN4O95460 622 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 C1orf105O95561 183 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 F7P08709 466 aaPredicted RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 CHRM5P08912 532 aaPredicted RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 CD9P21926 228 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 PRDX3P30048 256 aaKnown RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 STX2P32856 288 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 BDKRB1P46663 353 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 TUBB3Q13509 450 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 CUL1Q13616 776 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 ACSBG2Q5FVE4 666 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 NUP210LQ5VU65 1888 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 ANKS6Q68DC2 871 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 ZNF549Q6P9A3 640 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 PPP1R3BQ86XI6 285 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 ADGRF3Q8IZF5 1079 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 MYO1HQ8N1T3 1032 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 NOA1Q8NC60 698 aaKnown RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 OR2L8Q8NGY9 312 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 GIMAP7Q8NHV1 300 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 NAF1Q96HR8 494 aaKnown RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 SLC41A2Q96JW4 573 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 OR6C1Q96RD1 312 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 PITPNM3Q9BZ71 974 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 XKR8Q9H6D3 395 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 INTS7Q9NVH2 962 aaKnown RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 MOCS1Q9NZB8 636 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 FOXJ2Q9P0K8 574 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 RARRES3Q9UL19 164 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 PLAGL1Q9UM63 463 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 RUVBL2Q9Y230 463 aaKnown RBP12.58□□□□□ -0.4
CLK3-224ENST00000568605 B3GALT1Q9Y5Z6 326 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 NFS1Q9Y697 457 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 DMXL2Q8TDJ6 3036 aa12.58□□□□□ -0.4
CLK3-224ENST00000568605 A0A0J9YY10 115 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 TCRBV9S1A1TA0A576 114 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 KLK10O43240 276 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 PSIP1O75475 530 aaKnown RBP12.57□□□□□ -0.4
CLK3-224ENST00000568605 AHSGP02765 367 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 UGT2B7P16662 529 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 SSTR1P30872 391 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 PHBP35232 272 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 HSD17B2P37059 387 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 MAGEA4P43358 317 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 TMPRSS3P57727 454 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 SP140Q13342 867 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 NAB1Q13506 487 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 NAA25Q14CX7 972 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 SLC5A12Q1EHB4 618 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 RBM20Q5T481 1227 aaKnown RBP12.57□□□□□ -0.4
CLK3-224ENST00000568605 ZDHHC24Q6UX98 284 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 STRA8Q7Z7C7 330 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 RASGRP3Q8IV61 690 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 SPACA3Q8IXA5 215 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 CPNE9Q8IYJ1 553 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 D2HGDHQ8N465 521 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 OR8K5Q8NH50 307 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 VPS39Q96JC1 886 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 FCRL4Q96PJ5 515 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 FMO2Q99518 471 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 RHOJQ9H4E5 214 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 PLAC1Q9HBJ0 212 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 WDR70Q9NW82 654 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 SLC17A6Q9P2U8 582 aa12.57□□□□□ -0.4
CLK3-224ENST00000568605 CCDC88CQ9P219 2028 aa12.56□□□□□ -0.4
CLK3-224ENST00000568605 FAM95CA0A1B0GW59 222 aa12.56□□□□□ -0.4
CLK3-224ENST00000568605 ZBTB14O43829 449 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms