RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 ERGP11308 486 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 CNTFP26441 200 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 BDKRB1P46663 353 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 SERPINB9P50453 376 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 GFERP55789 205 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 USP10Q14694 798 aaKnown RBP18.84■□□□□ 0.61
DDX55-207ENST00000540763 ARHGAP19Q14CB8 494 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 ERCC6LQ2NKX8 1250 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 PHF19Q5T6S3 580 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 TAOK1Q7L7X3 1001 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 PIWIL4Q7Z3Z4 852 aaKnown RBP18.84■□□□□ 0.61
DDX55-207ENST00000540763 ADGRF3Q8IZF5 1079 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 OR2L8Q8NGY9 312 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 JPH3Q8WXH2 748 aaPredicted RBP18.84■□□□□ 0.61
DDX55-207ENST00000540763 PAFAH2Q99487 392 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 CMKLR1Q99788 373 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 AKAP7Q9P0M2 348 aaPredicted RBP18.84■□□□□ 0.61
DDX55-207ENST00000540763 TMEM9Q9P0T7 183 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.84■□□□□ 0.61
DDX55-207ENST00000540763 POMT2Q9UKY4 750 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 RUVBL2Q9Y230 463 aaKnown RBP18.84■□□□□ 0.61
DDX55-207ENST00000540763 IKBKGQ9Y6K9 419 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 PCM1Q15154 2024 aa18.84■□□□□ 0.61
DDX55-207ENST00000540763 C2orf74A8MZ97 194 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 FAM155BO75949 473 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 CYP2A7P20853 494 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 HSD17B2P37059 387 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 MLLT3P42568 568 aaPredicted RBP18.83■□□□□ 0.6
DDX55-207ENST00000540763 RAB10P61026 200 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 KIR2DS3Q14952 304 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 RTP5Q14D33 572 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.83■□□□□ 0.6
DDX55-207ENST00000540763 EMBQ6PCB8 327 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 IGF2-ASQ6U949 168 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 KMT5CQ86Y97 462 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 CEP97Q8IW35 865 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 OR9A1PQ8NGU1 263 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 WDR36Q8NI36 951 aaKnown RBP18.83■□□□□ 0.6
DDX55-207ENST00000540763 GATA6Q92908 595 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 NXPE2Q96DL1 559 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 TGM7Q96PF1 710 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 SLC12A9Q9BXP2 914 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 EPB41L4BQ9H329 900 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 ZNF768Q9H5H4 540 aaKnown RBP18.83■□□□□ 0.6
DDX55-207ENST00000540763 GPAMQ9HCL2 828 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 PCDHGA8Q9Y5G5 932 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 ANKRD12Q6UB98 2062 aa18.83■□□□□ 0.6
DDX55-207ENST00000540763 SNRNP200O75643 2136 aaKnown RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 EXOC1LA0A1B0GW35 172 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 PIPSLA2A3N6 862 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 ZNF839A8K0R7 811 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 BTN3A3O00478 584 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 FKBP9O95302 570 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 CHRM5P08912 532 aaPredicted RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 ENO2P09104 434 aaPredicted RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 POLR2CP19387 275 aaPredicted RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 SAT1P21673 171 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 MAP4P27816 1152 aaKnown RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 CRABP2P29373 138 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 SLC26A3P40879 764 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 MSH2P43246 934 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 SLC29A2Q14542 456 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 ANKS6Q68DC2 871 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 IRGCQ6NXR0 463 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 TMEM207Q6UWW9 146 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 UBE2R2Q712K3 238 aaPredicted RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 AGBL5Q8NDL9 886 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 AENQ8WTP8 325 aaKnown RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 SLC22A18Q96BI1 424 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 DHRS4Q9BTZ2 278 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 DERL2Q9GZP9 239 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 POLR1BQ9H9Y6 1135 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 PPCSQ9HAB8 311 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.82■□□□□ 0.6
DDX55-207ENST00000540763 LNPEPQ9UIQ6 1025 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 TSR3Q9UJK0 312 aaKnown RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 RALYQ9UKM9 306 aaKnown RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 RAB21Q9UL25 225 aa18.82■□□□□ 0.6
DDX55-207ENST00000540763 NOVA2Q9UNW9 492 aaKnown RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 V9GYY5 206 aaPredicted RBP18.82■□□□□ 0.6
DDX55-207ENST00000540763 KRT38O76015 456 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 LSSP48449 732 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 CSRP3P50461 194 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 KPNA2P52292 529 aaKnown RBP18.81■□□□□ 0.6
DDX55-207ENST00000540763 ZNF460Q14592 562 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 C16orf72Q14CZ0 275 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 CYP2A13Q16696 494 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 RAB11FIP2Q7L804 512 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 MCOLN3Q8TDD5 553 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 DCAKDQ8WVC6 231 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 KLHL6Q8WZ60 621 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 CAVIN3Q969G5 261 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 ISL2Q96A47 359 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 PITPNM3Q9BZ71 974 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 XKR8Q9H6D3 395 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 CAB39LQ9H9S4 337 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 PARVBQ9HBI1 364 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 C1GALT1Q9NS00 363 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 ACTR10Q9NZ32 417 aa18.81■□□□□ 0.6
DDX55-207ENST00000540763 PLAGL1Q9UM63 463 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms