RNA–Protein interactions for RNA: ENST00000514313.1

NUP54-215, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 537 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-215ENST00000514313 BMPERQ8N8U9 685 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 OR13J1Q8NGT2 312 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 FGFBP3Q8TAT2 258 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 RIT1Q92963 219 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 LINGO1Q96FE5 620 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 ARRDC1-AS1Q9H2J1 176 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 KLHL1Q9NR64 748 aa6.96□□□□□ -1.3
NUP54-215ENST00000514313 IARS2Q9NSE4 1012 aaKnown RBP6.96□□□□□ -1.3
NUP54-215ENST00000514313 A0A1W2PRV1 198 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 BICDL2A1A5D9 508 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 PPIP5K2O43314 1243 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 GSRP00390 522 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 THEGLP0DJG4 465 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 PTMSP20962 102 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 MTCP1P56278 107 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 GSDMDP57764 484 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 TUBA1BP68363 451 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 CX3CL1P78423 397 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 DMPKQ09013 629 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 VEZF1Q14119 521 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 SLC39A14Q15043 492 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 SLC39A12Q504Y0 691 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 STXBP5Q5T5C0 1151 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 NOTUMQ6P988 496 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 FAM171BQ6P995 826 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 NRARPQ7Z6K4 114 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 LONP2Q86WA8 852 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.95□□□□□ -1.3
NUP54-215ENST00000514313 ZNF441Q8N8Z8 693 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 THAP8Q8NA92 274 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 PPFIBP2Q8ND30 876 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 NPEPL1Q8NDH3 523 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 PHF21BQ96EK2 531 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
NUP54-215ENST00000514313 ZNF385AQ96PM9 386 aaKnown RBP6.95□□□□□ -1.3
NUP54-215ENST00000514313 HNRNPABQ99729 332 aaKnown RBP6.95□□□□□ -1.3
NUP54-215ENST00000514313 SLC5A7Q9GZV3 580 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 ZNF350Q9GZX5 532 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 GAREM1Q9H706 876 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 MID1IP1Q9NPA3 183 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 GKN1Q9NS71 199 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 DNAJC17Q9NVM6 304 aaKnown RBP6.95□□□□□ -1.3
NUP54-215ENST00000514313 RALYQ9UKM9 306 aaKnown RBP6.95□□□□□ -1.3
NUP54-215ENST00000514313 TMED3Q9Y3Q3 217 aa6.95□□□□□ -1.3
NUP54-215ENST00000514313 CD8B2A6NJW9 211 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 GAPDHSO14556 408 aaPredicted RBP6.94□□□□□ -1.3
NUP54-215ENST00000514313 FCGR1AP12314 374 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 CDH1P12830 882 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 ITIH1P19827 911 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 ZNF81P51508 661 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 THOP1P52888 689 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 MLLT10P55197 1068 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 STX1BP61266 288 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 ST8SIA6P61647 398 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 NPTX1Q15818 432 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 CA9Q16790 459 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 CTU2Q2VPK5 515 aaKnown RBP6.94□□□□□ -1.3
NUP54-215ENST00000514313 MCMDC2Q4G0Z9 681 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 ZNF449Q6P9G9 518 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 TMEM270Q6UE05 265 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 PIWIL4Q7Z3Z4 852 aaKnown RBP6.94□□□□□ -1.3
NUP54-215ENST00000514313 FBXL14Q8N1E6 418 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 RDM1Q8NG50 284 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 PDLIM5Q96HC4 596 aaKnown RBP6.94□□□□□ -1.3
NUP54-215ENST00000514313 ADGRG7Q96K78 797 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 SLITRK6Q9H5Y7 841 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 UBTD1Q9HAC8 227 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 LRRC4Q9HBW1 653 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 VPS18Q9P253 973 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 HEG1Q9ULI3 1381 aa6.94□□□□□ -1.3
NUP54-215ENST00000514313 EVPLQ92817 2033 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 A0A1W2PPW3 197 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 SMIM30A4D0T7 59 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 C4orf47A7E2U8 309 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 PRR32B1ATL7 298 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 HNRNPCL2B2RXH8 293 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 PROB1E7EW31 1015 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 SLC22A3O75751 556 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 ACAA1P09110 424 aaPredicted RBP6.93□□□□□ -1.3
NUP54-215ENST00000514313 JAK1P23458 1154 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 SLC6A6P31641 620 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 HSD17B3P37058 310 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 PDLIM4P50479 330 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 MFAP3P55082 362 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 ADARP55265 1226 aaKnown RBP6.93□□□□□ -1.3
NUP54-215ENST00000514313 EEF1A1P68104 462 aaKnown RBP6.93□□□□□ -1.3
NUP54-215ENST00000514313 ZNF415Q09FC8 603 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 ZBTB17Q13105 803 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 MFAP5Q13361 173 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 KBTBD12Q3ZCT8 623 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 EEF1A1P5Q5VTE0 462 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 C11orf63Q6NUN7 778 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 CASC4Q6P4E1 433 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 CYB5D1Q6P9G0 228 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 KCTD9Q7L273 389 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 SFR1Q86XK3 245 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 B4GALNT2Q8NHY0 566 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 CCDC107Q8WV48 283 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 SEPT1Q8WYJ6 367 aa6.93□□□□□ -1.3
NUP54-215ENST00000514313 PROX1Q92786 737 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms