RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 DNAJB1P25685 340 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 HOXA6P31267 233 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RRM2P31350 389 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 GTF2H1P32780 548 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CIITAP33076 1130 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 GP5P40197 560 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 IL15P40933 162 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MTIF2P46199 727 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RXRGP48443 463 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 OAZ1P54368 228 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MYL6P60660 151 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RAB4BP61018 213 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 PSMC5P62195 406 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 YPEL5P62699 121 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 UBE2IP63279 158 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RHAGQ02094 409 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 DMWDQ09019 674 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 NAB1Q13506 487 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 GRM4Q14833 912 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 FRMPD4Q14CM0 1322 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TGFBIQ15582 683 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 KCNJ8Q15842 424 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CCNG2Q16589 344 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TCTE1Q5JU00 501 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 PDPK2PQ6A1A2 396 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RFX8Q6ZV50 586 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 STXBP4Q6ZWJ1 553 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 ASRGL1Q7L266 308 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLFN11Q7Z7L1 901 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 PIM3Q86V86 326 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMTC1Q8IUR5 882 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 VSTM4Q8IW00 320 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 DHX40Q8IX18 779 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 LINC00518Q8N0U6 118 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 FBXL16Q8N461 479 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MMGT1Q8N4V1 131 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TBC1D19Q8N5T2 526 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF540Q8NDQ6 660 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 HMGB4Q8WW32 186 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 PRPF31Q8WWY3 499 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 NPIPB3Q92617 1050 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CENPIQ92674 756 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 STMN2Q93045 179 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MYDGFQ969H8 173 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RAD51AP1Q96B01 352 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 COQ8BQ96D53 544 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MSANTD3Q96H12 275 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZFYVE19Q96K21 471 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 ZNF560Q96MR9 790 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 RMDN3Q96TC7 470 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 WACQ9BTA9 647 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 ELOVL1Q9BW60 279 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 MRPS26Q9BYN8 205 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 LRMDAQ9H2I8 198 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CRLF2Q9HC73 371 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 WDR6Q9NNW5 1121 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 OBP2BQ9NPH6 170 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 LZTFL1Q9NQ48 299 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 HPS4Q9NQG7 708 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TMEM45AQ9NWC5 275 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 SAGE1Q9NXZ1 904 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 NDUFAF4Q9P032 175 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 IFNKQ9P0W0 207 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CD300AQ9UGN4 299 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 SLC12A6Q9UHW9 1150 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 PTBP2Q9UKA9 531 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 C19orf53Q9UNZ5 99 aaPredicted RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TNFSF13BQ9Y275 285 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TDRKHQ9Y2W6 561 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 UTP11Q9Y3A2 253 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 CHTOPQ9Y3Y2 248 aaKnown RBP4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 KDM3AQ9Y4C1 1321 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 HS3ST3B1Q9Y662 390 aa4.59□□□□□ -1.67
HMGB3P13-201ENST00000511263 TCHHQ07283 1943 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 MARF1Q9Y4F3 1742 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 HEATR9A2RTY3 570 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 A8MXQ7 604 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 PSMD11O00231 422 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 RNF103O00237 685 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ACOX3O15254 700 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 MAGEB3O15480 346 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CLOCKO15516 846 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CCDC22O60826 627 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TULP3O75386 442 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 DCTN3O75935 186 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ACTL6BO94805 426 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 BMP10O95393 424 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 APOC1P02654 83 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CSTBP04080 98 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 LCKP06239 509 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CYP3A4P08684 503 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 KRT16P08779 473 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ANPEPP15144 967 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 TNFAIP3P21580 790 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 PDIA3P30101 505 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 CD86P42081 329 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 ZNF84P51523 738 aa4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 PSMD4P55036 377 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 EIF3BP55884 814 aaKnown RBP4.58□□□□□ -1.68
HMGB3P13-201ENST00000511263 RPL10AP62906 217 aaKnown RBP4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms