RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 LENG9Q96B70 501 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 EFHD2Q96C19 240 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 LRRC39Q96DD0 335 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 MSI2Q96DH6 328 aaKnown RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 LINGO1Q96FE5 620 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 CDKN2AIPNLQ96HQ2 116 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 C8orf76Q96K31 380 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 EGLN2Q96KS0 407 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 PNKPQ96T60 521 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 GPA33Q99795 319 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ZNF559Q9BR84 538 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 FAM213AQ9BRX8 229 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 CDT1Q9H211 546 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 TMEM245Q9H330 911 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ROPN1Q9HAT0 212 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 Q9N2J8 555 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 MKKSQ9NPJ1 570 aaPredicted RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 TMEM51Q9NW97 253 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 TRNAU1APQ9NX07 287 aaKnown RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 QPCTLQ9NXS2 382 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 CNOT2Q9NZN8 540 aaKnown RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 NDUFA13Q9P0J0 144 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 TBC1D7Q9P0N9 293 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 ICKQ9UPZ9 632 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 CARD8Q9Y2G2 431 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 HBS1LQ9Y450 684 aaKnown RBP4.82□□□□□ -1.64
GABPB1-204ENST00000396464 CLIC4Q9Y696 253 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 PTCH1Q13635 1447 aa4.82□□□□□ -1.64
GABPB1-204ENST00000396464 GRXCR1A8MXD5 290 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 WRBO00258 174 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ANKRD28O15084 1053 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 OGTO15294 1046 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 AP5Z1O43299 807 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 DCXO43602 365 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 PRAMEF11O60813 436 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 JRKO75564 520 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 UGT2B4P06133 528 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 HLA-DOAP06340 250 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ASNSP08243 561 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 FCGR2AP12318 317 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 CPN2P22792 545 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SLC8A1P32418 973 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SHMT1P34896 483 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ANXA11P50995 505 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ZNF75DP51815 510 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 MFAP3P55082 362 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 RPS8P62241 208 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 CTAG1AP78358 180 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 HSD11B2P80365 405 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 TXNL4AP83876 142 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SLC25A3Q00325 362 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SYT16Q17RD7 645 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ARL13AQ5H913 290 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 RABL3Q5HYI8 236 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 CCNYL2Q5T2Q4 361 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 LRRC38Q5VT99 294 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 TBC1D9BQ66K14 1250 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 FCRLBQ6BAA4 426 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 EFCAB12Q6NXP0 572 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 CYB5D1Q6P9G0 228 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ENPP7Q6UWV6 458 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 PACS1Q6VY07 963 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 CCDC80Q76M96 950 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 BIVMQ86UB2 503 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 NOXA1Q86UR1 476 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 HAPLN4Q86UW8 402 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 GPR180Q86V85 440 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 IGFN1Q86VF2 1251 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 KLHDC8AQ8IYD2 350 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 MINDY2Q8NBR6 621 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ADPRHL1Q8NDY3 354 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 OR9A1PQ8NGU1 263 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 DQX1Q8TE96 717 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ATP8B4Q8TF62 1192 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 OIT3Q8WWZ8 545 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 PIGKQ92643 395 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 GLG1Q92896 1179 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SLCO4A1Q96BD0 722 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 DAZAP1Q96EP5 407 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 THOC3Q96J01 351 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ZNF583Q96ND8 569 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 LRFN5Q96NI6 719 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SIN3AQ96ST3 1273 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 CPNE1Q99829 537 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 TSPYL1Q9H0U9 437 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SIRPDQ9H106 197 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 PIGMQ9H3S5 423 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 TMEM231Q9H6L2 316 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 SFXN1Q9H9B4 322 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 VAT1LQ9HCJ6 419 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 AGPAT3Q9NRZ7 376 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ZCCHC3Q9NUD5 404 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ABHD10Q9NUJ1 306 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ASNSD1Q9NWL6 643 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 KLHL8Q9P2G9 620 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 RNF150Q9ULK6 438 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 ENTPD4Q9Y227 616 aa4.81□□□□□ -1.64
GABPB1-204ENST00000396464 FOXA2Q9Y261 457 aaPredicted RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 LSM4Q9Y4Z0 139 aaKnown RBP4.81□□□□□ -1.64
GABPB1-204ENST00000396464 AATKQ6ZMQ8 1374 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms