RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 PCSK2P16519 638 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 CCNHP51946 323 aaPredicted RBP16.88■□□□□ 0.29
CDCP1-201ENST00000296129 SLC13A2Q13183 592 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 LRRC32Q14392 662 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 PTPRCAPQ14761 206 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 UBXN2BQ14CS0 331 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 ACSBG2Q5FVE4 666 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 C22orf39Q6P5X5 142 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 MCFD2Q8NI22 146 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 HM13Q8TCT9 377 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 ZBED6CLQ96FA7 236 aaPredicted RBP16.88■□□□□ 0.29
CDCP1-201ENST00000296129 ZNF570Q96NI8 536 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 CNPPD1Q9BV87 410 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 NAV1Q8NEY1 1877 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 EDDM13A0A1B0GTR0 161 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 UPK3BL1B0FP48 263 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 UPK3BL2E5RIL1 263 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 PDE12Q6L8Q7 609 aaKnown RBP16.88■□□□□ 0.29
CDCP1-201ENST00000296129 RANBP3LQ86VV4 465 aaPredicted RBP16.88■□□□□ 0.29
CDCP1-201ENST00000296129 KIFC1Q9BW19 673 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 VPS29Q9UBQ0 182 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 SLC22A14Q9Y267 594 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 HAT1O14929 419 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 NME6O75414 186 aaPredicted RBP16.88■□□□□ 0.29
CDCP1-201ENST00000296129 RYKP34925 604 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 RFC2P35250 354 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 DPY19L1Q2PZI1 675 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 WDTC1Q8N5D0 677 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 ATP6V1C2Q8NEY4 427 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 HMGB4Q8WW32 186 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 VRTNQ9H8Y1 702 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 NEK6Q9HC98 313 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 GALPQ9UBC7 116 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 MRPS17Q9Y2R5 130 aaKnown RBP16.88■□□□□ 0.29
CDCP1-201ENST00000296129 GADD45GO95257 159 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 IL12AP29459 219 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 HSD17B2P37059 387 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 ACTR1BP42025 376 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 ACTR1AP61163 376 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 OR10H5Q8NGA6 315 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 DNAJB8Q8NHS0 232 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 TRIB2Q92519 343 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 IL12RB2Q99665 862 aa16.88■□□□□ 0.29
CDCP1-201ENST00000296129 A0A1W2PRB8 838 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 WWP2O00308 870 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 ABLIM1O14639 778 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 ZNF33AQ06730 810 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 PRAMEF14Q5SWL7 426 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 C1orf220Q5T0J3 134 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 PRAMEF13Q5VWM6 474 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CXorf57Q6NSI4 855 aaKnown RBP16.87■□□□□ 0.29
CDCP1-201ENST00000296129 FAM131AQ6UXB0 335 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 GJD3Q8N144 294 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CLDND1Q9NY35 253 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CFAP20Q9Y6A4 193 aaKnown RBP16.87■□□□□ 0.29
CDCP1-201ENST00000296129 XKRYO14609 159 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 C9P02748 559 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CBSLP0DN79 551 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 ZNF8P17098 575 aaPredicted RBP16.87■□□□□ 0.29
CDCP1-201ENST00000296129 EDNRBP24530 442 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CBSP35520 551 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 FAM91A1Q658Y4 838 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 RPS27LQ71UM5 84 aaKnown RBP16.87■□□□□ 0.29
CDCP1-201ENST00000296129 FAM110BQ8TC76 370 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 SIRPGQ9P1W8 387 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CYTH4Q9UIA0 394 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 RHAGQ02094 409 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CREB5Q02930 508 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 SCARB2Q14108 478 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 MBOAT1Q6ZNC8 495 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 LRRC58Q96CX6 371 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 ART5Q96L15 291 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 SIGLEC10Q96LC7 697 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 IKZF2Q9UKS7 526 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 RIIAD1A6NNX1 92 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CHST10O43529 356 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 SSNA1O43805 119 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 MMP20O60882 483 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 STC1P52823 247 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 PCLAFQ15004 111 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 GPRIN1Q7Z2K8 1008 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 C2CD4AQ8NCU7 369 aaPredicted RBP16.87■□□□□ 0.29
CDCP1-201ENST00000296129 CRYBG1Q9Y4K1 1723 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 PLK4O00444 970 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 COCHO43405 550 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 ALDH4A1P30038 563 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 AVPR1BP47901 424 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 COX18Q8N8Q8 333 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 OR4F6Q8NGB9 312 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 WDR12Q9GZL7 423 aaKnown RBP16.87■□□□□ 0.29
CDCP1-201ENST00000296129 DERL2Q9GZP9 239 aa16.87■□□□□ 0.29
CDCP1-201ENST00000296129 NLE1Q9NVX2 485 aaPredicted RBP16.87■□□□□ 0.29
CDCP1-201ENST00000296129 IDH3BO43837 385 aa16.86■□□□□ 0.29
CDCP1-201ENST00000296129 PGDP52209 483 aa16.86■□□□□ 0.29
CDCP1-201ENST00000296129 PCDH1Q08174 1060 aa16.86■□□□□ 0.29
CDCP1-201ENST00000296129 TIFABQ6ZNK6 161 aa16.86■□□□□ 0.29
CDCP1-201ENST00000296129 TPRG1Q6ZUI0 275 aa16.86■□□□□ 0.29
CDCP1-201ENST00000296129 PEG10Q86TG7 708 aaKnown RBP16.86■□□□□ 0.29
CDCP1-201ENST00000296129 THOC6Q86W42 341 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms