RNA–Protein interactions for RNA: ENST00000601091.5

LIG1-220, Transcript of DNA ligase 1, humanhuman

TSL 5

Gene LIG1, Length 3,957 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-220ENST00000601091 SLC39A13Q96H72 371 aa10.25□□□□□ -0.77
LIG1-220ENST00000601091 ABCG8Q9H221 673 aa10.25□□□□□ -0.77
LIG1-220ENST00000601091 BPIFA1Q9NP55 256 aa10.25□□□□□ -0.77
LIG1-220ENST00000601091 ZDHHC7Q9NXF8 308 aa10.25□□□□□ -0.77
LIG1-220ENST00000601091 GPRC5BQ9NZH0 403 aa10.25□□□□□ -0.77
LIG1-220ENST00000601091 ZNF229Q9UJW7 825 aa10.25□□□□□ -0.77
LIG1-220ENST00000601091 ZMIZ1Q9ULJ6 1067 aa10.25□□□□□ -0.77
LIG1-220ENST00000601091 AQP12BA6NM10 295 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 TTLL8A6PVC2 850 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 PTGESO14684 152 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 GRID2O43424 1007 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SIX3O95343 332 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 FBXO48Q5FWF7 155 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 PIGGQ5H8A4 983 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 RPS27LQ71UM5 84 aaKnown RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 ADCK1Q86TW2 530 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 PROSER1Q86XN7 944 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 AQP12AQ8IXF9 295 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 CENPSQ8N2Z9 138 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SPPL2BQ8TCT7 592 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SIPA1Q96FS4 1042 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 GPR21Q99679 349 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SLC29A1Q99808 456 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 TP63Q9H3D4 680 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 MUC13Q9H3R2 512 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 ELOVL6Q9H5J4 265 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 OPTCQ9UBM4 332 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 LRRC37AA6NMS7 1700 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 QSER1Q2KHR3 1735 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 J3KR12 359 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 CYBBP04839 570 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 MBL2P11226 248 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 PRKCAP17252 672 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 GRK4P32298 578 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 CAPZA1P52907 286 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 FOXK1P85037 733 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SSPNQ14714 243 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 RETSATQ6NUM9 610 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 MSANTD2Q6P1R3 559 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 ADAMTSL2Q86TH1 951 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 HORMAD1Q86X24 394 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 CILP2Q8IUL8 1156 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 EID3Q8N140 333 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 KDM1BQ8NB78 822 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 PPP3R2Q96LZ3 170 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 IL12RB2Q99665 862 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 PSD2Q9BQI7 771 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 NEURL2Q9BR09 285 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 TBCDQ9BTW9 1192 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 CXCL16Q9H2A7 254 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 ALG2Q9H553 416 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 NMRK2Q9NPI5 230 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SEMA3GQ9NS98 782 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 AGO1Q9UL18 857 aaKnown RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 PCDHB8Q9UN66 801 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 MAN2B2Q9Y2E5 1009 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 DENRO43583 198 aaKnown RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 OR7A10O76100 309 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 PAPSS2O95340 614 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 HMGN1P05114 100 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 OGNP20774 298 aaKnown RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 HSD3B2P26439 372 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 MC4RP32245 332 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 ENTPD1P49961 510 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 POLR2JP52435 117 aaKnown RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 SREBF2Q12772 1141 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 EPS8Q12929 822 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SNTA1Q13424 505 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 CLCA4Q14CN2 919 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 ZMYND11Q15326 602 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 GPR107Q5VW38 600 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 PM20D1Q6GTS8 502 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 NLRC3Q7RTR2 1065 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 C8orf59Q8N0T1 100 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 ZSCAN1Q8NBB4 408 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 OR10Z1Q8NGY1 313 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 C12orf57Q99622 126 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 TFB2MQ9H5Q4 396 aaKnown RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 INVSQ9Y283 1065 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 TBC1D30Q9Y2I9 924 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 GREB1LQ9C091 1923 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 ILVBLA1L0T0 632 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 OR6C75A6NL08 312 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 VSTM5A8MXK1 200 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 CFAP99D6REC4 459 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 MAFKO60675 156 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 DNTTP04053 509 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 UMPSP11172 480 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 MAPK1P28482 360 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 DBPQ10586 325 aaPredicted RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 TSNQ15631 228 aaKnown RBP10.24□□□□□ -0.77
LIG1-220ENST00000601091 TECRLQ5HYJ1 363 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 SIRPB2Q5JXA9 342 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 HECTD3Q5T447 861 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 ARMC12Q5T9G4 340 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 GLYATQ6IB77 296 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 C16orf59Q7L2K0 433 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 TMC8Q8IU68 726 aa10.24□□□□□ -0.77
LIG1-220ENST00000601091 P3H2Q8IVL5 708 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms