RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 ERVK-11Q9UQG0 969 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 PTRH2Q9Y3E5 179 aaKnown RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 ATXN2Q99700 1313 aaKnown RBP4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 SDK2Q58EX2 2172 aa4.7□□□□□ -1.66
HMGB1P23-201ENST00000518743 CYP2D7A0A087X1C5 515 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 VPS37CA5D8V6 355 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 NEURL1O76050 574 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 UNGP13051 313 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ENO3P13929 434 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 DDX5P17844 614 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ERCC2P18074 760 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 CIITAP33076 1130 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 GP5P40197 560 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 TNNT3P45378 269 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 POLGP54098 1239 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 NTHL1P78549 312 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 MRPS6P82932 125 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 GABPAQ06546 454 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 IGFBP7Q16270 282 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ALG11Q2TAA5 492 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 RABL6Q3YEC7 729 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 SYTL3Q4VX76 610 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 LINGO2Q7L985 606 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 TDRPQ86YL5 185 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 LINC00346Q8IVM7 164 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 DENND6AQ8IWF6 608 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 DHX40Q8IX18 779 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ADGRF4Q8IZF3 695 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 TTC30BQ8N4P2 665 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 SLC25A41Q8N5S1 370 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ARL14EPQ8N8R7 260 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 MSANTD4Q8NCY6 345 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 GJC3Q8NFK1 279 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 DNAJB3Q8WWF6 145 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ING5Q8WYH8 240 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 FGF11Q92914 225 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 REPS1Q96D71 796 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ARSGQ96EG1 525 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ELMOD3Q96FG2 381 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 JAKMIP1Q96N16 626 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ABHD1Q96SE0 405 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 FAM110AQ9BQ89 295 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 TMEM79Q9BSE2 394 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 DUSP26Q9BV47 211 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 MRPL9Q9BYD2 267 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 TMEM117Q9H0C3 514 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 NT5C3AQ9H0P0 336 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 MMP27Q9H306 513 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 MAGEE1Q9HCI5 957 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 PIH1D3Q9NQM4 214 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 MRPL17Q9NRX2 175 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 ANKRD10Q9NXR5 420 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 SELENONQ9NZV5 590 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 CNOT8Q9UFF9 292 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 NDRG3Q9UGV2 375 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 DDX25Q9UHL0 483 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 FBXW11Q9UKB1 542 aa4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 FBN1P35555 2871 aaKnown RBP4.69□□□□□ -1.66
HMGB1P23-201ENST00000518743 CSPG4Q6UVK1 2322 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 MTCL1Q9Y4B5 1905 aaKnown RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 ARHGEF17Q96PE2 2063 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 FOXO6A8MYZ6 492 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 KLRF2D3W0D1 207 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 E9PAM4 449 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 F8W810 466 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 RHODO00212 210 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 PAPSS1O43252 624 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 STX6O43752 255 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 SLC25A17O43808 307 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 MMP2P08253 660 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 ETFAP13804 333 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 CD59P13987 128 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 ATP6V1B1P15313 513 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 HOXA5P20719 270 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 AGAP20933 346 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 DCTP40126 519 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 BUD31P41223 144 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 CLDN2P57739 230 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 TAS2R40P59535 323 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 MGAT3Q09327 533 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 KLF10Q13118 480 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 SPATS1Q496A3 300 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 ZNF628Q5EBL2 1059 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 ARMC4Q5T2S8 1044 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 NUGGCQ68CJ6 796 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 DHRS7BQ6IAN0 325 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 LCTLQ6UWM7 567 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 CFAP77Q6ZQR2 320 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 SLC24A5Q71RS6 500 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 ERN2Q76MJ5 926 aaKnown RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 CCDC91Q7Z6B0 441 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 CAMK1DQ8IU85 385 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 WDR63Q8IWG1 891 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 GUF1Q8N442 669 aaKnown RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 SCCPDHQ8NBX0 429 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 RASSF8Q8NHQ8 419 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 OSR1Q8TAX0 266 aaPredicted RBP4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 PIGOQ8TEQ8 1089 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 SNAPC3Q92966 411 aa4.68□□□□□ -1.66
HMGB1P23-201ENST00000518743 SARAFQ96BY9 339 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms