RNA–Protein interactions for RNA: ENST00000518385.5

SDC2-202, Transcript of syndecan 2, humanhuman

TSL 5 BASIC

Gene SDC2, Length 1,583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-202ENST00000518385 AURKBQ96GD4 344 aaPredicted RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 PDLIM5Q96HC4 596 aaKnown RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 BRINP2Q9C0B6 783 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 P2RY12Q9H244 342 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 ALG2Q9H553 416 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 SUV39H2Q9H5I1 410 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 HPS4Q9NQG7 708 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 TRMT6Q9UJA5 497 aaKnown RBP17.95■□□□□ 0.46
SDC2-202ENST00000518385 PSME2Q9UL46 239 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 MED16Q9Y2X0 877 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 CDH23Q9H251 3354 aa17.95■□□□□ 0.46
SDC2-202ENST00000518385 WASH3PC4AMC7 463 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 UBFD1O14562 309 aaKnown RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 STX16O14662 325 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 ABCB7O75027 752 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 PRSS23O95084 383 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 CAPN3P20807 821 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 MAP4P27816 1152 aaKnown RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 GSTM2P28161 218 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 HNF1BP35680 557 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 LTBRP36941 435 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 GSK3BP49841 420 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 BCAP31P51572 246 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 POLR2LP62875 67 aaKnown RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 MLLT1Q03111 559 aaPredicted RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 RELAQ04206 551 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 NFATC3Q12968 1075 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 LCP2Q13094 533 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 SKIV2LQ15477 1246 aaKnown RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 RGS21Q2M5E4 152 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 SETMARQ53H47 684 aaPredicted RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 LY6G5CQ5SRR4 150 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 GPR107Q5VW38 600 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 ANKRD26P1Q6NSI1 321 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 PAQR3Q6TCH7 311 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 TPRG1Q6ZUI0 275 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 USP45Q70EL2 814 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 TAS2R42Q7RTR8 314 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 RYBPQ8N488 228 aaPredicted RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 HDAC2Q92769 488 aaKnown RBP17.94■□□□□ 0.46
SDC2-202ENST00000518385 PTERQ96BW5 349 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 RIPOR3Q96MK2 946 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 ATOH8Q96SQ7 321 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 BPIFA1Q9NP55 256 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 SLC52A3Q9NQ40 469 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 ACSS2Q9NR19 701 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 CLDND1Q9NY35 253 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 CDC14AQ9UNH5 594 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 PCDHGA4Q9Y5G9 962 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 DNAJC15Q9Y5T4 150 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 GPR45Q9Y5Y3 372 aa17.94■□□□□ 0.46
SDC2-202ENST00000518385 TRBV5-4A0A0C4DH59 114 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 C1orf232A0A0U1RR37 186 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 NEDD8-MDP1E9PL57 170 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 EI24O14681 340 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 CDK14O94921 469 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 TYRP14679 529 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 CTPS1P17812 591 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 NFKBIAP25963 317 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 VARSP26640 1264 aaKnown RBP17.93■□□□□ 0.46
SDC2-202ENST00000518385 ALDH3A2P51648 485 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 IL2P60568 153 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 NFYCQ13952 458 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 RBFAQ8N0V3 343 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 DPP10Q8N608 796 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 PNPLA1Q8N8W4 532 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 S100ZQ8WXG8 99 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 PHF21BQ96EK2 531 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 MSLNLQ96KJ4 702 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 SMIM14Q96QK8 99 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 MCCC1Q96RQ3 725 aaPredicted RBP17.93■□□□□ 0.46
SDC2-202ENST00000518385 GPR21Q99679 349 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 UNKQ9C0B0 810 aaKnown RBP17.93■□□□□ 0.46
SDC2-202ENST00000518385 TNFRSF12AQ9NP84 129 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 RIC8BQ9NVN3 520 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 AIG1Q9NVV5 245 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 IFT80Q9P2H3 777 aaPredicted RBP17.93■□□□□ 0.46
SDC2-202ENST00000518385 PCDHB3Q9Y5E6 796 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 MYOFQ9NZM1 2061 aa17.93■□□□□ 0.46
SDC2-202ENST00000518385 FAM234BA2RU67 622 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 FUOMA2VDF0 154 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 HEPACAM2A8MVW5 462 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 SULT1C4O75897 302 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 CLPXO76031 633 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 MLYCDO95822 493 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 ALOX5P09917 674 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 ALPIP09923 528 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 PRSS56P0CW18 603 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 UGT1A6P19224 532 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 UGT1A1P22309 533 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 UGT1A4P22310 534 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 FCARP24071 287 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 UGT1A3P35503 534 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 UGT1A5P35504 534 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 SPAM1P38567 509 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 NNMTP40261 264 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 MTHFRP42898 656 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 KCNC1P48547 511 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 EMX2Q04743 252 aa17.92■□□□□ 0.46
SDC2-202ENST00000518385 ZNF846Q147U1 533 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms