RNA–Protein interactions for RNA: ENST00000451088.6

GTF3C3-207, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 3

Gene GTF3C3, Length 488 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-207ENST00000451088 DNAJB4Q9UDY4 337 aa4.28□□□□□ -1.72
GTF3C3-207ENST00000451088 KCNG2Q9UJ96 466 aa4.28□□□□□ -1.72
GTF3C3-207ENST00000451088 NDRG2Q9UN36 371 aaKnown RBP4.28□□□□□ -1.72
GTF3C3-207ENST00000451088 DAAM1Q9Y4D1 1078 aa4.28□□□□□ -1.72
GTF3C3-207ENST00000451088 MORC2Q9Y6X9 1032 aaPredicted RBP4.28□□□□□ -1.72
GTF3C3-207ENST00000451088 CELSR3Q9NYQ7 3312 aa4.28□□□□□ -1.72
GTF3C3-207ENST00000451088 ADAMTS9Q9P2N4 1935 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 ICE1Q9Y2F5 2266 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 A0A096LPK6 155 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 FAM157AC9JC47 383 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 SLC16A5O15375 505 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 TEX28O15482 410 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 ITM2AO43736 263 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 RFPL2O75678 378 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 DDHD2O94830 711 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 CTDNEP1O95476 244 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 HNRNPA1P09651 372 aaKnown RBP eCLIP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 OR52Z1P0C646 297 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 CYP11B2P19099 503 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 GLRA2P23416 452 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 HOXA9P31269 272 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 HOXC13P31276 330 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 ABCD1P33897 745 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 SSR1P43307 286 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 GPR12P47775 334 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 TUBA1BP68363 451 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 DMP1Q13316 513 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 IL13RA2Q14627 380 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 KRT72Q14CN4 511 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 KYAT1Q16773 422 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 ME3Q16798 604 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 KIF19Q2TAC6 998 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 ZNF628Q5EBL2 1059 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 KRT79Q5XKE5 535 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 FUT10Q6P4F1 479 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 H1FNTQ75WM6 255 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 CACNA2D4Q7Z3S7 1137 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 KBTBD6Q86V97 674 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 NR2C2APQ86WQ0 139 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 TMEM173Q86WV6 379 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 NECAB1Q8N987 351 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 LSM14AQ8ND56 463 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 DEFB124Q8NES8 71 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 CSGALNACT1Q8TDX6 532 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 THAP4Q8WY91 577 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 NCSTNQ92542 709 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 GOLGA1Q92805 767 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 ZNF707Q96C28 371 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 CPB2Q96IY4 423 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 PPP1R10Q96QC0 940 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 APOL6Q9BWW8 343 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 C1QTNF4Q9BXJ3 329 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 NPFFR1Q9GZQ6 430 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 LHPPQ9H008 270 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 NT5C3AQ9H0P0 336 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 FZD8Q9H461 694 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 NXF3Q9H4D5 531 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 UPF2Q9HAU5 1272 aaKnown RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 XPNPEP1Q9NQW7 623 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 HEBP1Q9NRV9 189 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 TXLNGQ9NUQ3 528 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 KCND2Q9NZV8 630 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 WRAP73Q9P2S5 460 aaPredicted RBP4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 NLKQ9UBE8 527 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 LRWD1Q9UFC0 647 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 TAGLN3Q9UI15 199 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 HES2Q9Y543 173 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 PCDHGA5Q9Y5G8 931 aa4.27□□□□□ -1.73
GTF3C3-207ENST00000451088 FREM2Q5SZK8 3169 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 LAMA1P25391 3075 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 SPAARA0A1B0GVQ0 90 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 ARHGEF37A1IGU5 675 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 TMEM189-UBE2V1I3L0A0 370 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 K7ERI5 159 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CDX4O14627 284 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 JAK2O60674 1132 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 B3GAT3O94766 335 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CBX6O95503 412 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CAVIN2O95810 425 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CKMT1AP12532 417 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 FDPSP14324 419 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CALRP27797 417 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 HOXA6P31267 233 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 ELF1P32519 619 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 RDXP35241 583 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CCT6AP40227 531 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 MXI1P50539 228 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 EEF1A2Q05639 463 aaKnown RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 GRSF1Q12849 480 aaKnown RBP eCLIP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CUL4BQ13620 913 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 PSMD5Q16401 504 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 AP5B1Q2VPB7 878 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 TUBB8Q3ZCM7 444 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 RILPL1Q5EBL4 403 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 PPM1LQ5SGD2 360 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 ATF7IP2Q5U623 682 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 GJB7Q6PEY0 223 aa4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 CCNI2Q6ZMN8 369 aaPredicted RBP4.26□□□□□ -1.73
GTF3C3-207ENST00000451088 GET4Q7L5D6 327 aaPredicted RBP4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms