RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 A8MU76 341 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 BTN3A3O00478 584 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 BRINP1O60477 761 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 C1orf105O95561 183 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 RHOXF2BP0C7M4 288 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 JMJD7P0C870 316 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 MPC1LP0DKB6 136 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 FDXRP22570 491 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 CSTF2P33240 577 aaKnown RBP eCLIP17.13■□□□□ 0.33
EPCAM-203ENST00000419334 CCNFP41002 786 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 CDKN2DP55273 166 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 PPP1CAP62136 330 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 PRKAA1Q13131 559 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 GRB7Q14451 532 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 KYNUQ16719 465 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 HECTD2Q5U5R9 776 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 TTC23LQ6PF05 361 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 FOXR1Q6PIV2 292 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 FAM92BQ6ZTR7 304 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 ADGRF3Q8IZF5 1079 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 GPATCH11Q8N954 259 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 MAGEC3Q8TD91 643 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 RAD51AP1Q96B01 352 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 SLC46A1Q96NT5 459 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 RHOXF2Q9BQY4 288 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 MENTQ9BUN1 341 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 TWSG1Q9GZX9 223 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 RHOJQ9H4E5 214 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 XKR8Q9H6D3 395 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 OR6C2Q9NZP2 312 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 RUVBL2Q9Y230 463 aaKnown RBP17.13■□□□□ 0.33
EPCAM-203ENST00000419334 VWA7Q9Y334 891 aa17.13■□□□□ 0.33
EPCAM-203ENST00000419334 TLCD2A6NGC4 264 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 CXorf49A8MYA2 514 aaPredicted RBP17.12■□□□□ 0.33
EPCAM-203ENST00000419334 BTN3A1O00481 513 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 PSIP1O75475 530 aaKnown RBP17.12■□□□□ 0.33
EPCAM-203ENST00000419334 RASSF9O75901 435 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 ITGA2BP08514 1039 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 HGFP14210 728 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 POLR2CP19387 275 aaPredicted RBP17.12■□□□□ 0.33
EPCAM-203ENST00000419334 ITIH1P19827 911 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 RBMS1P29558 406 aaKnown RBP17.12■□□□□ 0.33
EPCAM-203ENST00000419334 CACHD1Q5VU97 1274 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 LRRC8EQ6NSJ5 796 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 CPNE9Q8IYJ1 553 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 CARFQ8N187 725 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 KDF1Q8NAX2 398 aaPredicted RBP17.12■□□□□ 0.33
EPCAM-203ENST00000419334 FBF1Q8TES7 1133 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 UBXN4Q92575 508 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 CNTNAP3BQ96NU0 1288 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 NRTNQ99748 197 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 CPNE1Q99829 537 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 CNTNAP3Q9BZ76 1288 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 ZNF768Q9H5H4 540 aaKnown RBP17.12■□□□□ 0.33
EPCAM-203ENST00000419334 ASCL3Q9NQ33 180 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 NINJ2Q9NZG7 142 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 TXNDC16Q9P2K2 825 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 PISDQ9UG56 409 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 TSR3Q9UJK0 312 aaKnown RBP17.12■□□□□ 0.33
EPCAM-203ENST00000419334 POMT2Q9UKY4 750 aa17.12■□□□□ 0.33
EPCAM-203ENST00000419334 FAM95CA0A1B0GW59 222 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 CDRT15L2A8MXV6 281 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 B4E171 279 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 KIF1CO43896 1103 aaKnown RBP17.11■□□□□ 0.33
EPCAM-203ENST00000419334 PIAS1O75925 651 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 TNFSF15O95150 251 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 MCM3P25205 808 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 PKLRP30613 574 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 GP5P40197 560 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 TSPAN7P41732 249 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 BDKRB1P46663 353 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 RGS4P49798 205 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 RAB28P51157 221 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 KPNA2P52292 529 aaKnown RBP17.11■□□□□ 0.33
EPCAM-203ENST00000419334 ERVPABLB-1P60509 514 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 PDAP1Q13442 181 aaKnown RBP17.11■□□□□ 0.33
EPCAM-203ENST00000419334 NAB1Q13506 487 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 TBC1D25Q3MII6 688 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 KBTBD12Q3ZCT8 623 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 PAQR3Q6TCH7 311 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 CYHR1Q6ZMK1 362 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 RASGRP3Q8IV61 690 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 ZCCHC14Q8WYQ9 949 aaKnown RBP17.11■□□□□ 0.33
EPCAM-203ENST00000419334 KLHL6Q8WZ60 621 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 VPS39Q96JC1 886 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 ZNF578Q96N58 590 aaPredicted RBP17.11■□□□□ 0.33
EPCAM-203ENST00000419334 MAP3K3Q99759 626 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 OLFM1Q99784 485 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 RAB11FIP5Q9BXF6 653 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 CDC42EP4Q9H3Q1 356 aaKnown RBP17.11■□□□□ 0.33
EPCAM-203ENST00000419334 PLAGL1Q9UM63 463 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 NFU1Q9UMS0 254 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 IGF2RP11717 2491 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 FRYQ5TBA9 3013 aa17.11■□□□□ 0.33
EPCAM-203ENST00000419334 GSAPA4D1B5 854 aa17.1■□□□□ 0.33
EPCAM-203ENST00000419334 C2orf74A8MZ97 194 aa17.1■□□□□ 0.33
EPCAM-203ENST00000419334 AGRPO00253 132 aa17.1■□□□□ 0.33
EPCAM-203ENST00000419334 RASGRF2O14827 1237 aa17.1■□□□□ 0.33
EPCAM-203ENST00000419334 SNRNP200O75643 2136 aaKnown RBP17.1■□□□□ 0.33
EPCAM-203ENST00000419334 CATP04040 527 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms