RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 NARS2Q96I59 477 aaKnown RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 KATNBL1Q9H079 304 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SLCO3A1Q9UIG8 710 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ERVK-11Q9UQG0 969 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 TCRBV5S1A1TA0A578 114 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SSX4O60224 188 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ULK1O75385 1050 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ECI2O75521 394 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 RASAL1O95294 804 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ALOX5P09917 674 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ITIH1P19827 911 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ALDH3B2P48448 385 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 IL2P60568 153 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SPIBQ01892 262 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ACAP2Q15057 778 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 OR4D1Q15615 310 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 TAPT1Q6NXT6 567 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 FAM117BQ6P1L5 589 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SLC27A1Q6PCB7 646 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 FUNDC1Q8IVP5 155 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 MYLPFQ96A32 169 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 INTS10Q9NVR2 710 aaKnown RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 ZNF624Q9P2J8 865 aaPredicted RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 H3BM21 787 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 CTDSP2O14595 271 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SEPT4O43236 478 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ITGB1P05556 798 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 GADD45AP24522 165 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ALDH3A2P51648 485 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 LCP2Q13094 533 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 UNC50Q53HI1 259 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 STXBP5Q5T5C0 1151 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 OSTM1Q86WC4 334 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 MFSD6LQ8IWD5 586 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 TRPV1Q8NER1 839 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 OR7D4Q8NG98 312 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 OR4L1Q8NH43 312 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 C1GALT1C1Q96EU7 318 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 CGREF1Q99674 301 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 OR51E2Q9H255 320 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 TLR8Q9NR97 1041 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 FAM118AQ9NWS6 357 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ZNF490Q9ULM2 529 aaPredicted RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 TBC1D30Q9Y2I9 924 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 TTC3P53804 2025 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 AQP12BA6NM10 295 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SAP18O00422 153 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 PRMT5O14744 637 aaPredicted RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 PER2O15055 1255 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 TSPAN1O60635 241 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 CAPNS1P04632 268 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SERPINF2P08697 491 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 RAP2AP10114 183 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 GRK4P32298 578 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 FEN1P39748 380 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 ALDH7A1P49419 539 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 RENBPP51606 427 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ZNF404Q494X3 552 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SLC39A12Q504Y0 691 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ZNF678Q5SXM1 525 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 FAM45BPQ6NSW5 357 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 XRRA1Q6P2D8 792 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 STRADAQ7RTN6 431 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 TMEM135Q86UB9 458 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 LSRQ86X29 649 aaPredicted RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 AQP12AQ8IXF9 295 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 PHC2Q8IXK0 858 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 RNF175Q8N4F7 328 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SETD9Q8NE22 299 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 PHOX2BQ99453 314 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 LRRC3Q9BY71 257 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 DUSP16Q9BY84 665 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 DSN1Q9H410 356 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 FARSBQ9NSD9 589 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 ARL15Q9NXU5 204 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 AP3D1O14617 1153 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 COX7A2P14406 83 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SLC15A1P46059 708 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 CLCNKBP51801 687 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 AFF1P51825 1210 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 HERVK_113P63132 956 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 EMX1Q04741 257 aaPredicted RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 TSTQ16762 297 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 SLC36A3Q495N2 470 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 TECRLQ5HYJ1 363 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 PAMR1Q6UXH9 720 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 CLEC20AQ6ZU45 233 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 MEX3DQ86XN8 651 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 RAB43Q86YS6 212 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 SYT12Q8IV01 421 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ZFP41Q8N8Y5 198 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ASCC1Q8N9N2 400 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 OR6C4Q8NGE1 309 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 OR5AK3PQ8NH89 298 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 EEF1AKMT1Q8WVE0 214 aa8.65□□□□□ -1.02
RTN4-206ENST00000394611 ZNF486Q96H40 463 aaPredicted RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 MTERF1Q99551 399 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 RBM4BQ9BQ04 359 aaKnown RBP8.65□□□□□ -1.02
RTN4-206ENST00000394611 PAAF1Q9BRP4 392 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms