RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 WBP11Q9Y2W2 641 aaKnown RBP5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 PCDHGA5Q9Y5G8 931 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 SIPA1L1O43166 1804 aa5.5□□□□□ -1.53
RNU4-39P-201ENST00000362455 DOCK1Q14185 1865 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 XIRP2A4UGR9 3374 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 PTPRFP10586 1907 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 TRBC2A0A5B9 178 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 MAGEB17A8MXT2 336 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 KBTBD13C9JR72 458 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 H3BNX3 289 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 CLGNO14967 610 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 CTAGE5O15320 804 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 PRKAB2O43741 272 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 ZWINTO95229 277 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 HSPA4LO95757 839 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 SNAI1O95863 264 aaPredicted RBP5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 GLULP15104 373 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 CPT2P23786 658 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 HOXD3P31249 432 aaPredicted RBP5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 FASLGP48023 281 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 TAS2R38P59533 333 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 ALCAMQ13740 583 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 KRT33BQ14525 404 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 ZNF628Q5EBL2 1059 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 CCDC158Q5M9N0 1113 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 FAM69BQ5VUD6 431 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 WDR73Q6P4I2 378 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 ANKRD33Q7Z3H0 272 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 HAUS6Q7Z4H7 955 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 IRF2BP2Q7Z5L9 587 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 LDB1Q86U70 411 aaPredicted RBP5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 VSIG1Q86XK7 387 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 NKAIN3Q8N8D7 197 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 PRR26Q8N8Z3 221 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 KLHDC9Q8NEP7 349 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 OR6J1Q8NGC5 347 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 OR14A16Q8NHC5 309 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 WFIKKN2Q8TEU8 576 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 ADAMTS14Q8WXS8 1223 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 TAAR8Q969N4 342 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 VPS33AQ96AX1 596 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 SLC25A33Q9BSK2 321 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 PPIL3Q9H2H8 161 aaKnown RBP5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 KCNK15Q9H427 330 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 LARSQ9P2J5 1176 aaKnown RBP5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 AMACRQ9UHK6 382 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 PADI3Q9ULW8 664 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 CCL27Q9Y4X3 112 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 MGAMO43451 1857 aa5.49□□□□□ -1.53
RNU4-39P-201ENST00000362455 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 TCRBV21S2A2A0A5A6 115 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 URADA6NGE7 173 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 HS3ST1O14792 307 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 SURF6O75683 361 aaKnown RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 MATR3P43243 847 aaKnown RBP eCLIP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 NR4A2P43354 598 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 SEC61BP60468 96 aaKnown RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 Q0VFX4 171 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 TWIST1Q15672 202 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 LETM2Q2VYF4 491 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 LEXMQ3ZCV2 418 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 FAM98BQ52LJ0 330 aaKnown RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 KCNT1Q5JUK3 1230 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 DHRS7BQ6IAN0 325 aaPredicted RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 KRT80Q6KB66 452 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 DPY19L2P1Q6NXN4 242 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 PAPD4Q6PIY7 484 aaKnown RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 INTS8Q75QN2 995 aaKnown RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 ADIPOR2Q86V24 386 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 CEP97Q8IW35 865 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 CHERPQ8IWX8 916 aaKnown RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 SDR42E1Q8WUS8 393 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 ASB5Q8WWX0 329 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 ZNF653Q96CK0 615 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 RMDN1Q96DB5 314 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 SMC6Q96SB8 1091 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 CMKLR1Q99788 373 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 HGH1Q9BTY7 390 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 RAD21L1Q9H4I0 556 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 ERVMER34-1Q9H9K5 563 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 TRMT1Q9NXH9 659 aaKnown RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 TMEM184BQ9Y519 407 aaPredicted RBP5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 RIPK3Q9Y572 518 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 DOCK2Q92608 1830 aa5.48□□□□□ -1.53
RNU4-39P-201ENST00000362455 FAM90A26D6RGX4 464 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 MPHOSPH10O00566 681 aaKnown RBP5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 KCNN4O15554 427 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 ZNF217O75362 1048 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 SERPINI2O75830 405 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 FLOT1O75955 427 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 TOMM40O96008 361 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 TIMP1P01033 207 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 VPREB1P12018 145 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 CSF2RAP15509 400 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 UGT1A1P22309 533 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 HRH2P25021 359 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 NMBRP28336 390 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 SSTR2P30874 369 aa5.47□□□□□ -1.53
RNU4-39P-201ENST00000362455 CCR3P51677 355 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms