RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 GNAZP19086 355 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 DNAJB1P25685 340 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PSMD8P48556 350 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 SERINC3Q13530 473 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 HLA-DQA1Q5Y7H0 255 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 CLIP4Q8N3C7 705 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PACRGLQ8N7B6 248 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PNPLA1Q8N8W4 532 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 SLC22A14Q9Y267 594 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PCDHGA11Q9Y5H2 935 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 MEIS3P2A8K0S8 358 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 SORBS2O94875 1100 aaKnown RBP16.89■□□□□ 0.29
GABRB3-202ENST00000311550 DIRAS1O95057 198 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 HAPLN1P10915 354 aaPredicted RBP16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PRKACGP22612 351 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 MXD1Q05195 221 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 GRB7Q14451 532 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 DCST1Q5T197 706 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PKD1L3Q7Z443 1732 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 C8orf48Q96LL4 319 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 A0A1W2PRU2 124 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 HAT1O14929 419 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 HTRA2O43464 458 aaPredicted RBP16.89■□□□□ 0.29
GABRB3-202ENST00000311550 AP2A2O94973 939 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 OPN1SWP03999 348 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 CTSEP14091 401 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 SPANXN4Q5MJ08 99 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 TSGA13Q96PP4 275 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 MRM3Q9HC36 420 aaKnown RBP16.89■□□□□ 0.29
GABRB3-202ENST00000311550 TRIM39Q9HCM9 518 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 TBC1D14Q9P2M4 693 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 WBP11Q9Y2W2 641 aaKnown RBP16.89■□□□□ 0.29
GABRB3-202ENST00000311550 TLL1O43897 1013 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 OR1I1O60431 355 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PRAMEF11O60813 436 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 GPR32O75388 356 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 PCCBP05166 539 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 ETV4P43268 484 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 RPS6KA3P51812 740 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 TRIM32Q13049 653 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 UPP1Q16831 310 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 ZZZ3Q8IYH5 903 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 ART5Q96L15 291 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 YIPF1Q9Y548 306 aa16.89■□□□□ 0.29
GABRB3-202ENST00000311550 GTF2E2P29084 291 aaKnown RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 GANABQ14697 944 aaKnown RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 TGFBIQ15582 683 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 HDDC2Q7Z4H3 204 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 ZNF280BQ86YH2 543 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 SLITRK2Q9H156 845 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 CRYBG1Q9Y4K1 1723 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 CLIC1O00299 241 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 IL7RP16871 459 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 RGS1Q08116 209 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 ZBTB6Q15916 424 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 IFI44LQ53G44 452 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 ZNF730Q6ZMV8 503 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 RNF19BQ6ZMZ0 732 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 TMEM40Q8WWA1 233 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 TRIM63Q969Q1 353 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 RSPH9Q9H1X1 276 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 KAT8Q9H7Z6 458 aaKnown RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 CTPS2Q9NRF8 586 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 HLA-DQA2P01906 255 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 C8AP07357 584 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 LAPTM4AQ15012 233 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 ZNHIT3Q15649 155 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 SYT16Q17RD7 645 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 TRIM71Q2Q1W2 868 aaKnown RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 TNFAIP8L2Q6P589 184 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 AGMOQ6ZNB7 445 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 OMA1Q96E52 524 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 SOX17Q9H6I2 414 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 MARCH4Q9P2E8 410 aaPredicted RBP16.88■□□□□ 0.29
GABRB3-202ENST00000311550 OR10H1Q9Y4A9 318 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 CCNB2O95067 398 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 EPHX1P07099 455 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 ENGP17813 658 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 SUV39H2Q9H5I1 410 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 C3orf14Q9HBI5 128 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 COQ6Q9Y2Z9 468 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 RNF11Q9Y3C5 154 aa16.88■□□□□ 0.29
GABRB3-202ENST00000311550 H0YC42 278 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 MAFKO60675 156 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 ERN1O75460 977 aaKnown RBP16.87■□□□□ 0.29
GABRB3-202ENST00000311550 PAPSS2O95340 614 aaPredicted RBP16.87■□□□□ 0.29
GABRB3-202ENST00000311550 GCAP28676 217 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 TLR1Q15399 786 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 OR10T2Q8NGX3 314 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 ADAMTS15Q8TE58 950 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 PLK4O00444 970 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 PLOD3O60568 738 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 PSMA1P25786 263 aaKnown RBP16.87■□□□□ 0.29
GABRB3-202ENST00000311550 GPR33Q49SQ1 333 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 ZNF544Q6NX49 715 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 RTP4Q96DX8 246 aa16.87■□□□□ 0.29
GABRB3-202ENST00000311550 CLEC4MQ9H2X3 399 aaPredicted RBP16.87■□□□□ 0.29
GABRB3-202ENST00000311550 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms