RNA–Protein interactions for RNA: ENST00000296129.5

CDCP1-201, Transcript of CUB domain containing protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDCP1, Length 6,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCP1-201ENST00000296129 IGFALSP35858 605 aa16.91■□□□□ 0.3
CDCP1-201ENST00000296129 SLBPQ14493 270 aaKnown RBP eCLIP16.91■□□□□ 0.3
CDCP1-201ENST00000296129 ZNF514Q96K75 400 aaPredicted RBP16.91■□□□□ 0.3
CDCP1-201ENST00000296129 C11orf16Q9NQ32 467 aa16.91■□□□□ 0.3
CDCP1-201ENST00000296129 CDC7O00311 574 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 CASKO14936 926 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 AHCYL1O43865 530 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 GPR32O75388 356 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 BDKRB1P46663 353 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 OLR1P78380 273 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 DLG1Q12959 904 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 RNF220Q5VTB9 566 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 OAFQ86UD1 273 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 IGDCC3Q8IVU1 814 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 RASSF5Q8WWW0 418 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 SLC38A3Q99624 504 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 GPR22Q99680 433 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 PRAMEF11O60813 436 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 LYNP07948 512 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 PSMD4P55036 377 aaKnown RBP16.9■□□□□ 0.3
CDCP1-201ENST00000296129 TRAP1Q12931 704 aaKnown RBP16.9■□□□□ 0.3
CDCP1-201ENST00000296129 TEAD4Q15561 434 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 FAM92BQ6ZTR7 304 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 AHSA2Q719I0 299 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 C14orf80Q86SX3 495 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 SMG8Q8ND04 991 aaKnown RBP16.9■□□□□ 0.3
CDCP1-201ENST00000296129 SLC38A4Q969I6 547 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 C1GALT1C1Q96EU7 318 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 MIPEPQ99797 713 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 ADAMTS10Q9H324 1103 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 NOBOXO60393 691 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 CPN2P22792 545 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 MAGEA11P43364 429 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 IFI44LQ53G44 452 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 GPR65Q8IYL9 337 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 COQ10BQ9H8M1 238 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 FGF18O76093 207 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 KHKP50053 298 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 LRRC66Q68CR7 880 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 METTL21AQ8WXB1 218 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 RAB11FIP5Q9BXF6 653 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.9■□□□□ 0.3
CDCP1-201ENST00000296129 LAMB4A4D0S4 1761 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 A0A0G2JN53 185 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 ITGAXP20702 1163 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 TCEAL1Q15170 157 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 ENPP7Q6UWV6 458 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 TMC8Q8IU68 726 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 USP29Q9HBJ7 922 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 TLR9Q9NR96 1032 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 TDP1Q9NUW8 608 aa16.9■□□□□ 0.3
CDCP1-201ENST00000296129 CCR8P51685 355 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 HERC3Q15034 1050 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 QPRTQ15274 297 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 LRRC70Q7Z2Q7 622 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 EBF3Q9H4W6 596 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 CARS2Q9HA77 564 aaKnown RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 RPRD1BQ9NQG5 326 aaKnown RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 DGKBQ9Y6T7 804 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 A0A0D9SEW6 157 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 SOX4Q06945 474 aaPredicted RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 ZNF461Q8TAF7 563 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 PIGXQ8TBF5 258 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 RBM18Q96H35 190 aaKnown RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 C5orf34Q96MH7 638 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 CHID1Q9BWS9 393 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 CDADC1Q9BWV3 514 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 NECTIN3Q9NQS3 549 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 RGPD1P0DJD0 1748 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 SOD2P04179 222 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 OMPP47874 163 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 NCBP2P52298 156 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 SERINC3Q13530 473 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 TNFAIP8L2Q6P589 184 aaPredicted RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 TMPRSS11AQ6ZMR5 421 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 ZNF598Q86UK7 904 aaKnown RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 SLC32A1Q9H598 525 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 CALML5Q9NZT1 146 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 TLL2Q9Y6L7 1015 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 INPPL1O15357 1258 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 BEST1O76090 585 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 TGFB1P01137 390 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 TYRP14679 529 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 PRKCHP24723 683 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 PIK3R6Q5UE93 754 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 GAL3ST4Q96RP7 486 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 FAM72CH0Y354 149 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 LEFTY2O00292 366 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 RAP2AP10114 183 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 SLC18A1P54219 525 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 SLC18A2Q05940 514 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 FAM72AQ5TYM5 149 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 FAM72DQ6L9T8 149 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 GOLGA7Q7Z5G4 137 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 GRASPQ7Z6J2 395 aaPredicted RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 FAM72BQ86X60 149 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 CILP2Q8IUL8 1156 aa16.89■□□□□ 0.29
CDCP1-201ENST00000296129 FBXO15Q8NCQ5 510 aaPredicted RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 MRM3Q9HC36 420 aaKnown RBP16.89■□□□□ 0.29
CDCP1-201ENST00000296129 PPM1HQ9ULR3 514 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms