RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 NgrnQ99KS2 293 aaKnown RBP14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Dhx34Q9DBV3 1145 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Acsl4Q9QUJ7 711 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Rnf11Q9QYK7 154 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Morf4l2Q9R0Q4 288 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 LipaQ9Z0M5 397 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Il18rapQ9Z2B1 614 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Tmem245B1AZA5 876 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 HalP35492 657 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 PtpaP58389 323 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Sem1P60897 70 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Adra1bP97717 514 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Scrn3Q3TMH2 418 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Defb48Q3UW22 87 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Eri2Q5BKS4 688 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Sema4aQ62178 760 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 NovQ64299 354 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 PapolgQ6PCL9 739 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Sdr16c5Q7TQA3 309 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Olfr1310Q8VF85 312 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Def8Q99J78 448 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Trim12aQ99PQ1 284 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ccdc130Q9D516 385 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ppp2r3cQ9JK24 453 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 PrepQ9QUR6 710 aa14.48□□□□□ -0.09
Nup88-202ENSMUST00000108530 Gm3854A0A1B0GSS6 495 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Lzts3A2AHG0 700 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Arhgap36B1AUC7 590 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Prrt4B2RU40 902 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ankrd34aB2RW11 495 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Gm2832F7AEC7 200 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Cyp1a1P00184 524 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Csf2rb2P26954 878 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 AdslP54822 484 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 TgfbiP82198 683 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 DhpsQ3TXU5 369 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Arhgap17Q3UIA2 846 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Armc5Q5EBP3 926 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 B3gnt3Q5JCS9 372 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Fam46cQ5SSF7 391 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Hspa1aQ61696 641 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Il1rapQ61730 570 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Pou4f2Q63934 411 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Rbl1Q64701 1063 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Cep78Q6IRU7 790 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Slc39a10Q6P5F6 833 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Tmco6Q8BQX5 494 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Zfp57Q8C6P8 421 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Slc46a2Q8CA03 479 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Zbtb8bQ8CII0 484 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Eva1bQ8K2Y3 164 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ssh3Q8K330 649 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Akr1c13Q8VC28 323 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Vps11Q91W86 941 aaKnown RBP14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Gmpr2Q99L27 348 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Snrpb2Q9CQI7 225 aaKnown RBP14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Sohlh2Q9D489 467 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 ProdhQ9WU79 599 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Eif4hQ9WUK2 248 aaKnown RBP14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 MipepA6H611 711 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Cldn24D3YXJ9 220 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Dcpp2E9PYC2 171 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Dcpp1L7N1X9 171 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 P01665 111 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 P01666 111 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ifngr1P15261 477 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Pxmp2P42925 194 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Tnfsf4P43488 198 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Lrrc3P59034 257 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Anxa4P97429 319 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Kcna4Q61423 654 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 DcstampQ7TNJ0 470 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Vmn1r33Q8R2E0 305 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Slc5a9Q8VDT1 685 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Fam3cQ91VU0 227 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ackr4Q924I3 350 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Mrpl45Q9D0Q7 306 aaKnown RBP14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Rpl4Q9D8E6 419 aaKnown RBP14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Efhd2Q9D8Y0 240 aaKnown RBP14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Rai2Q9QVY8 529 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Zbp1Q9QY24 411 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 PapolbQ9WVP6 641 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Cdc7Q9Z0H0 564 aa14.47□□□□□ -0.09
Nup88-202ENSMUST00000108530 Olfr1200A2ATJ4 336 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Nedd9O35177 833 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 ZfrO88532 1074 aaKnown RBP14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ccl5P30882 91 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Cpsf6Q6NVF9 551 aaKnown RBP14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Rspry1Q8BVR6 576 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ccdc90bQ8C3X2 256 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Vmn1r22Q8R2D1 302 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Ms4a10Q99N03 267 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Q9CWU4 180 aaKnown RBP14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 EbplQ9D0P0 206 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Mrpl14Q9D1I6 145 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Dlc1Q9R0Z9 1092 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 Atp6ap1Q9R1Q9 463 aa14.46□□□□□ -0.09
Nup88-202ENSMUST00000108530 D3Ertd254eA0A0G2JEM5 796 aa14.46□□□□□ -0.1
Nup88-202ENSMUST00000108530 Mageb4A2A9R3 556 aa14.46□□□□□ -0.1
Nup88-202ENSMUST00000108530 Zbtb34A2ATY4 518 aa14.46□□□□□ -0.1
Retrieved 100 of 22,080 RNA–protein pairs in 32.5 ms