RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 HAS1Q92839 578 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 DUSP16Q9BY84 665 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 MED28Q9H204 178 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 METTL7AQ9H8H3 244 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 PCDHGB5Q9Y5G0 923 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 A0A0J9YVX5 310 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 INPPL1O15357 1258 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 ADNP2Q6IQ32 1131 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 SPAG4Q9NPE6 437 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 HAO2Q9NYQ3 351 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 ACTL7BQ9Y614 415 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 RPTORQ8N122 1335 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 GLYATL1P3A0A0U1RQE8 302 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 ATG13O75143 517 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 OTCP00480 354 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 NWD1Q149M9 1564 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 CRTC1Q6UUV9 634 aa16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 ZNF808Q8N4W9 903 aaPredicted RBP16.74■□□□□ 0.27
CACNA1A-253ENST00000637927 E7ENQ6 273 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 E7ENX8 843 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 SHOXO15266 292 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 MTX2O75431 263 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 FMO1Q01740 532 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 AADACL4Q5VUY2 407 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 ARSKQ6UWY0 536 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 ZSCAN1Q8NBB4 408 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 NKX2-3Q8TAU0 364 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 PHPT1Q9NRX4 125 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 KCNE2Q9Y6J6 123 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 OR14I1A6ND48 311 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC15A5A6NIM6 579 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 WASHC1A8K0Z3 465 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 CSTBP04080 98 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 NCBP2P52298 156 aaKnown RBP eCLIP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 DSC2Q02487 901 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 KCNC4Q03721 635 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 BATFQ16520 125 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 CHADLQ6NUI6 762 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 WASH2PQ6VEQ5 465 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 TMPRSS11AQ6ZMR5 421 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 IGFN1Q86VF2 1251 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 CDK15Q96Q40 435 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 LEF1Q9UJU2 399 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 ADSSP30520 456 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC9B1Q4ZJI4 515 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 WASHC2DQ5SRD0 308 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 ZC3H10Q96K80 434 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 MYO10Q9HD67 2058 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 E9PAM4 449 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 LEPRP48357 1165 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 PSEN1P49768 467 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 CDK7P50613 346 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 ST3GAL1Q11201 340 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 PYROXD2Q8N2H3 581 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 SCLYQ96I15 445 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 DGAT2Q96PD7 388 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 COPS8Q99627 209 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 MGME1Q9BQP7 344 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 MRPS30Q9NP92 439 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 EDNRAP25101 427 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 CDH12P55289 794 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 ZNF565Q8N9K5 539 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 PPP3R2Q96LZ3 170 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 TVP23BQ9NYZ1 205 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 RAI2Q9Y5P3 530 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 VARSP26640 1264 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 GLUD2P49448 558 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 MPP1Q00013 466 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 FIGNQ5HY92 759 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 CD101Q93033 1021 aa16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 ZFRQ96KR1 1074 aaKnown RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 CCNL2Q96S94 520 aaPredicted RBP16.73■□□□□ 0.27
CACNA1A-253ENST00000637927 FAM155AB1AL88 458 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC16A5O15375 505 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 MSCO60682 206 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 GBAP04062 536 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 IDSP22304 550 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 ZNF135P52742 658 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 E2F2Q14209 437 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 LIPMQ5VYY2 423 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 CAPN13Q6MZZ7 669 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 AP3S1Q92572 193 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 ADAD1Q96M93 576 aaKnown RBP16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC39A3Q9BRY0 314 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC17A7Q9P2U7 560 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 TVP23AA6NH52 213 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 PAPSS2O95340 614 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 NADKO95544 446 aaPredicted RBP16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 SLC5A3P53794 718 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 TAS2R50P59544 299 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 GTF2H2Q13888 395 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 TMEM164Q5U3C3 297 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 GTF2H2CQ6P1K8 395 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 AKAP14Q86UN6 197 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 JAGN1Q8N5M9 183 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 TMEM145Q8NBT3 493 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 SMARCD2Q92925 531 aa16.72■□□□□ 0.27
CACNA1A-253ENST00000637927 HMCESQ96FZ2 354 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms