RNA–Protein interactions for RNA: ENST00000548676.5

CAPRIN2-216, Transcript of caprin family member 2, humanhuman

TSL 1 (best)

Gene CAPRIN2, Length 3,221 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2-216ENST00000548676 PRDM12Q9H4Q4 367 aa6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 RANBP3Q9H6Z4 567 aaPredicted RBP6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 CYP4F12Q9HCS2 524 aa6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 IFT46Q9NQC8 304 aa6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 PDLIM7Q9NR12 457 aa6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 IGSF5Q9NSI5 407 aa6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 WDR70Q9NW82 654 aa6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 PIH1D1Q9NWS0 290 aaKnown RBP6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 SRP68Q9UHB9 627 aaKnown RBP6.4□□□□□ -1.39
CAPRIN2-216ENST00000548676 ZNF831Q5JPB2 1677 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 LOC100506127A0A0U1RQW1 187 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SPATA31C2B4DYI2 1134 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ARNTLO00327 626 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 MYL12BO14950 172 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ATP6AP2O75787 350 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SCO1O75880 301 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CST3P01034 146 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 AHSGP02765 367 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CYBBP04839 570 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 MYL12AP19105 171 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ALAS2P22557 587 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CHMP24386 653 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SCNN1GP51170 649 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 HERVK_113P63132 956 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SLC6A3Q01959 620 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PRKG2Q13237 762 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SMAD1Q15797 465 aaKnown RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ZNF678Q5SXM1 525 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PDZK1Q5T2W1 519 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 LCN1P1Q5VSP4 162 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 KIAA1614Q5VZ46 1190 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 RAP1GAP2Q684P5 730 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 TEX261Q6UWH6 196 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 NIM1KQ8IY84 436 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 OR8H3Q8N146 312 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ACVR1CQ8NER5 493 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 OR2T12Q8NG77 320 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ERVK-6Q9BXR3 956 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PIGUQ9H490 435 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SETD4Q9NVD3 440 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 LIMD1Q9UGP4 676 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 NDRG4Q9ULP0 352 aaKnown RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PCDHGB3Q9Y5G1 929 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 MAGED1Q9Y5V3 778 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 U3KQ87 197 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 TMEM150BA6NC51 233 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ACKR2O00590 384 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PIP5K1BO14986 540 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 OGTO15294 1046 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SH3BP5O60239 455 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ADAM11O75078 769 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 NPM3O75607 178 aaKnown RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 IFNA14P01570 189 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 TPOP07202 933 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 RRASP10301 218 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 HOXB8P17481 243 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 C4BPBP20851 252 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 KELP23276 732 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 RPS3P23396 243 aaKnown RBP eCLIP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 HLA-FP30511 346 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 RECQLP46063 649 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CCT3P49368 545 aaKnown RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 RRAS2P62070 204 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PCDH1Q08174 1060 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 DBPQ10586 325 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SPP2Q13103 211 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CSHL1Q14406 222 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PCID2Q5JVF3 399 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 GNASQ5JWF2 1037 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 LRRC66Q68CR7 880 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 BICRALQ6AI39 1079 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CLEC6AQ6EIG7 209 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 TRNP1Q6NT89 227 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 XRRA1Q6P2D8 792 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 HHIPL2Q6UWX4 724 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CYHR1Q6ZMK1 362 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ANKS3Q6ZW76 656 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 LIMS2Q7Z4I7 341 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 BBS7Q8IWZ6 715 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 TAGAPQ8N103 731 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 C9orf62Q8N4C0 152 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CCNYQ8ND76 341 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ZNF680Q8NEM1 530 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PPHLN1Q8NEY8 458 aaKnown RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 OR5T2Q8NGG2 359 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 FAM162AQ96A26 154 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 FAM149B1Q96BN6 582 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 PYCR2Q96C36 320 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 KCTD15Q96SI1 283 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 LGMNQ99538 433 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 KATNAL1Q9BW62 490 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 CATSPERBQ9H7T0 1116 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 UBQLN2Q9UHD9 624 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 SLC23A1Q9UHI7 598 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 RAB23Q9ULC3 237 aa6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 COL5A3P25940 1745 aaPredicted RBP6.39□□□□□ -1.39
CAPRIN2-216ENST00000548676 ZNF98A6NK75 572 aa6.38□□□□□ -1.39
CAPRIN2-216ENST00000548676 M0R082 166 aa6.38□□□□□ -1.39
CAPRIN2-216ENST00000548676 MFSD11O43934 449 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms