RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 POLR2CP19387 275 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ACADLP28330 430 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ARL4DP49703 201 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 VPS41P49754 854 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PPP1CAP62136 330 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SH3BP2P78314 561 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 HSD11B2P80365 405 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ACY1Q03154 408 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PRKG2Q13237 762 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SRSF6Q13247 344 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BOP1Q14137 746 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MAP7Q14244 749 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SEMA3AQ14563 771 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BRD3Q15059 726 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KCTD19Q17RG1 926 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TAF1BQ53T94 588 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TIPARPQ7Z3E1 657 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SDCCAG8Q86SQ7 713 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LDB1Q86U70 411 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CAND1Q86VP6 1230 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BPHLQ86WA6 291 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RASGRP3Q8IV61 690 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NLGN4XQ8N0W4 816 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SIDT2Q8NBJ9 832 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MCUQ8NE86 351 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NLGN4YQ8NFZ3 816 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ASZ1Q8WWH4 475 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 EFHD1Q9BUP0 239 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PDE7BQ9NP56 450 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RRAGDQ9NQL2 400 aaPredicted RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SYBUQ9NX95 663 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 POLG2Q9UHN1 485 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SOX13Q9UN79 622 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NEU2Q9Y3R4 380 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ATRXP46100 2492 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SMG1Q96Q15 3661 aaKnown RBP9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 HEATR5BQ9P2D3 2071 aa9.46□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PRMT5O14744 637 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PFDN6O15212 129 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ZNF185O15231 689 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PHF2O75151 1096 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 AVILO75366 819 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GPC4O75487 556 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NDUFS3O75489 264 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 VAPBO95292 243 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CCNYL3P0C7X3 344 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MLNP12872 115 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FOLR1P15328 257 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TCP1P17987 556 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ITGB6P18564 788 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PRDX3P30048 256 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CCR7P32248 378 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ARCN1P48444 511 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FNTAP49354 379 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KPNA2P52292 529 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ABHD18Q0P651 414 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SYTL3Q4VX76 610 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TMTC4Q5T4D3 741 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ANKRD22Q5VYY1 191 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KIAA1614Q5VZ46 1190 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MRNIPQ6NTE8 343 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CES3Q6UWW8 571 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 C6orf15Q6UXA7 325 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 NAPRTQ6XQN6 538 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SYT10Q6XYQ8 523 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 AMIGO1Q86WK6 493 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LRRC6Q86X45 466 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PPP1R3BQ86XI6 285 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TBC1D21Q8IYX1 336 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MPP5Q8N3R9 675 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 D2HGDHQ8N465 521 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ESX1Q8N693 406 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 OR52E1Q8NGJ3 308 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 CPT1BQ92523 772 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TTC9Q92623 222 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MFSD3Q96ES6 412 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ELMO2Q96JJ3 720 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FCRL4Q96PJ5 515 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 TCF12Q99081 682 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 XAB2Q9HCS7 855 aaKnown RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 PRDM9Q9NQV7 894 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 C1GALT1Q9NS00 363 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MARCH4Q9P2E8 410 aaPredicted RBP9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 RARRES3Q9UL19 164 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 ASF1AQ9Y294 204 aa9.45□□□□□ -0.9
TNFRSF1A-214ENST00000543048 LOC101059948A0A1B0GTJ6 334 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 FAM237BA0A1B0GVD1 139 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 GSAPA4D1B5 854 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 SLC9B1P1A6NJY1 282 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 IQCF5A8MTL0 148 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 C2orf74A8MZ97 194 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BTN3A3O00478 584 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 BTN3A1O00481 513 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KPNA5O15131 536 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KDM1AO60341 852 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 KIAA0754O94854 1291 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 DLGAP3O95886 979 aa9.44□□□□□ -0.9
TNFRSF1A-214ENST00000543048 MT-ND3P03897 115 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms