RNA–Protein interactions for RNA: ENST00000539661.5

RAB40C-205, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 3 BASIC

Gene RAB40C, Length 2,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-205ENST00000539661 MAGEA2P43356 314 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 MAPKAPK3Q16644 382 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 AP5B1Q2VPB7 878 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 ZNF792Q3KQV3 632 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 CPZQ66K79 652 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 FAM171BQ6P995 826 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 CDKN2AIPNLQ96HQ2 116 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 GPR21Q99679 349 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 NPAP1Q9NZP6 1156 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 PKP3Q9Y446 797 aa17.27■□□□□ 0.36
RAB40C-205ENST00000539661 TBX1O43435 398 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 EFNA1P20827 205 aaPredicted RBP17.27■□□□□ 0.35
RAB40C-205ENST00000539661 CLK3P49761 638 aaKnown RBP17.27■□□□□ 0.35
RAB40C-205ENST00000539661 PTPRCAPQ14761 206 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 LETMD1Q6P1Q0 360 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 PYURFQ96I23 114 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 OR2B2Q9GZK3 357 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 NXF2Q9GZY0 626 aaKnown RBP17.27■□□□□ 0.35
RAB40C-205ENST00000539661 KATNBL1Q9H079 304 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 TMEM248Q9NWD8 314 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 CD274Q9NZQ7 290 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 INVSQ9Y283 1065 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 GMPPBQ9Y5P6 360 aa17.27■□□□□ 0.35
RAB40C-205ENST00000539661 ANKRD34BA5PLL1 514 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 RAD51BO15315 384 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 IL6P05231 212 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 CAPN1P07384 714 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 HAPLN1P10915 354 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 ARHGDIAP52565 204 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 HK3P52790 923 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 CSNK2BP67870 215 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PRKCDQ05655 676 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PPP1R8Q12972 351 aaKnown RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 MAD2L1Q13257 205 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 GBX1Q14549 363 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 CES5AQ6NT32 575 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 DET1Q7L5Y6 550 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 TSPYL5Q86VY4 417 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 CYP4Z1Q86W10 505 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PGBD5Q8N414 524 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 OR52B6Q8NGF0 335 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 ATL1Q8WXF7 558 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 RPL3LQ92901 407 aaKnown RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 NCLNQ969V3 563 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 ZFP42Q96MM3 310 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 SIGLEC11Q96RL6 698 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 ITPAQ9BY32 194 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PRDM5Q9NQX1 630 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 NUDT5Q9UKK9 219 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 EIF3LQ9Y262 564 aaKnown RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 VPS9D1Q9Y2B5 631 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 MITFO75030 526 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 FAM20BO75063 409 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 VPS26AO75436 327 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 FKBP9O95302 570 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 MOCS2O96007 188 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PBX3P40426 434 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 NR4A2P43354 598 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PPP3CCP48454 512 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 CLK1P49759 484 aaKnown RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 MAD2L1BPQ15013 274 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 KDM4DQ6B0I6 523 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 LAIR1Q6GTX8 287 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 AFTPHQ6ULP2 937 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 CALHM3Q86XJ0 350 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 MSRB3Q8IXL7 192 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PSMG2Q969U7 264 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 PDLIM5Q96HC4 596 aaKnown RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 SERPINB11Q96P15 392 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 ACBD6Q9BR61 282 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 ZYG11BQ9C0D3 744 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 RIBC2Q9H4K1 309 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 IKZF5Q9H5V7 419 aa17.26■□□□□ 0.35
RAB40C-205ENST00000539661 NLE1Q9NVX2 485 aaPredicted RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 NDRG4Q9ULP0 352 aaKnown RBP17.26■□□□□ 0.35
RAB40C-205ENST00000539661 NDUFS3O75489 264 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 TSPAN12O95859 305 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 SERPINA1P01009 418 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 SMIM10L2AP0DMW4 78 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 SMIM10L2BP0DMW5 78 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 TRPC1P48995 793 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 HTR6P50406 440 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 IL10RBQ08334 325 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 COLEC12Q5KU26 742 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 USP43Q70EL4 1123 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 PLPP6Q8IY26 295 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 CARNMT1Q8N4J0 409 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 AMER2Q8N7J2 671 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 POLR1EQ9GZS1 481 aaKnown RBP17.25■□□□□ 0.35
RAB40C-205ENST00000539661 NACA2Q9H009 215 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.25■□□□□ 0.35
RAB40C-205ENST00000539661 SLC25A37Q9NYZ2 338 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 NUDT4Q9NZJ9 180 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 TNPO3Q9Y5L0 923 aaKnown RBP17.25■□□□□ 0.35
RAB40C-205ENST00000539661 MRPL42Q9Y6G3 142 aaKnown RBP17.25■□□□□ 0.35
RAB40C-205ENST00000539661 PATJQ8NI35 1801 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 HAT1O14929 419 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 PLIN5Q00G26 463 aa17.25■□□□□ 0.35
RAB40C-205ENST00000539661 SIM2Q14190 667 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms