RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 GPR21Q99679 349 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 RHOXF2Q9BQY4 288 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 TRIT1Q9H3H1 467 aaKnown RBP13.22□□□□□ -0.29
FDPS-219ENST00000495308 XKR8Q9H6D3 395 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 MVB12BQ9H7P6 319 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 L2HGDHQ9H9P8 463 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 SMYD2Q9NRG4 433 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 MOCS1Q9NZB8 636 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 CIDEBQ9UHD4 219 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 PLAGL1Q9UM63 463 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 TDRKHQ9Y2W6 561 aaKnown RBP13.22□□□□□ -0.29
FDPS-219ENST00000495308 NFS1Q9Y697 457 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 ANKRD12Q6UB98 2062 aa13.22□□□□□ -0.29
FDPS-219ENST00000495308 NBEAQ8NFP9 2946 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 MN1Q10571 1320 aaPredicted RBP13.21□□□□□ -0.29
FDPS-219ENST00000495308 TCRBV9S1A1TA0A576 114 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 KRT87PA6NCN2 255 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 OR6C74A6NCV1 312 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 OR5K3A6NET4 321 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 CXorf49A8MYA2 514 aaPredicted RBP13.21□□□□□ -0.29
FDPS-219ENST00000495308 TMX2-CTNND1H3BSU7 103 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 KIF1CO43896 1103 aaKnown RBP13.21□□□□□ -0.29
FDPS-219ENST00000495308 BRINP1O60477 761 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 TPBGLP0DKB5 382 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 PGGT1BP53609 377 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 CDKN2DP55273 166 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 TIAL1Q01085 375 aaKnown RBP eCLIP13.21□□□□□ -0.29
FDPS-219ENST00000495308 CYP4F3Q08477 520 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 GBX1Q14549 363 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 UBAP2Q5T6F2 1119 aaKnown RBP13.21□□□□□ -0.29
FDPS-219ENST00000495308 IRGCQ6NXR0 463 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 FAM92BQ6ZTR7 304 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 TBC1D21Q8IYX1 336 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 OR4E2Q8NGC2 313 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 OR5K2Q8NHB8 316 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 WDR36Q8NI36 951 aaKnown RBP13.21□□□□□ -0.29
FDPS-219ENST00000495308 CD200R1Q8TD46 325 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 LCN9Q8WX39 176 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 KCNJ9Q92806 393 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 GRAMD1AQ96CP6 724 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 CNTNAP3BQ96NU0 1288 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 DPYSL5Q9BPU6 564 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 CNTNAP3Q9BZ76 1288 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 NRSN2Q9GZP1 204 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 POLR1BQ9H9Y6 1135 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 LRRC4CQ9HCJ2 640 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 LATS2Q9NRM7 1088 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 MTRF1LQ9UGC7 380 aaKnown RBP13.21□□□□□ -0.29
FDPS-219ENST00000495308 ICKQ9UPZ9 632 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 LOXL2Q9Y4K0 774 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 COMMD10Q9Y6G5 202 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 AK5Q9Y6K8 562 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 ITPR1Q14643 2758 aa13.21□□□□□ -0.29
FDPS-219ENST00000495308 USP24Q9UPU5 2620 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 BTN3A1O00481 513 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 VPS26AO75436 327 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 POLR2CP19387 275 aaPredicted RBP13.2□□□□□ -0.3
FDPS-219ENST00000495308 ITIH1P19827 911 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 MCM3P25205 808 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 ETV5P41161 510 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 BDKRB1P46663 353 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 RTP5Q14D33 572 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 KLHL38Q2WGJ6 581 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 CCSMST1Q4G0I0 132 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 TEX35Q5T0J7 233 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 UNC5DQ6UXZ4 953 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 C3orf62Q6ZUJ4 267 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 STRA8Q7Z7C7 330 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 GALNT7Q86SF2 657 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 OOSP2Q86WS3 158 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 PLXDC1Q8IUK5 500 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 CPNE9Q8IYJ1 553 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 FBXO39Q8N4B4 442 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 GPATCH11Q8N954 259 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 LMNTD1Q8N9Z9 388 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 PRR11Q96HE9 360 aaPredicted RBP13.2□□□□□ -0.3
FDPS-219ENST00000495308 SRMSQ9H3Y6 488 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 TFB2MQ9H5Q4 396 aaKnown RBP13.2□□□□□ -0.3
FDPS-219ENST00000495308 HRASLS2Q9NWW9 162 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 PDP2Q9P2J9 529 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 DHRS7Q9Y394 339 aa13.2□□□□□ -0.3
FDPS-219ENST00000495308 TPRP12270 2363 aaKnown RBP13.2□□□□□ -0.3
FDPS-219ENST00000495308 GSAPA4D1B5 854 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 FAM159BA6NKW6 160 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 BTN3A3O00478 584 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 PLD2O14939 933 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 RASSF9O75901 435 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 C1QAP02745 245 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 C9P02748 559 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 JMJD7P0C870 316 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 CCL4P13236 92 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 ATP5DP30049 168 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 LSSP48449 732 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 SEPHS1P49903 392 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 TRA2AQ13595 282 aaKnown RBP eCLIP13.19□□□□□ -0.3
FDPS-219ENST00000495308 GRB7Q14451 532 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 EFTUD2Q15029 972 aaKnown RBP eCLIP13.19□□□□□ -0.36e-9■■■□□ 15.5
FDPS-219ENST00000495308 KYNUQ16719 465 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 TTLL9Q3SXZ7 439 aa13.19□□□□□ -0.3
FDPS-219ENST00000495308 HECTD2Q5U5R9 776 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms