RNA–Protein interactions for RNA: ENST00000462146.6

PDZRN3-203, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-203ENST00000462146 SCUBE2Q9NQ36 999 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 SCML2Q9UQR0 700 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 CCL27Q9Y4X3 112 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 PCDHB14Q9Y5E9 798 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 PCDHGA10Q9Y5H3 936 aa11.52□□□□□ -0.57
PDZRN3-203ENST00000462146 E5RI56 91 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 M0R3G1 203 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 AREL1O15033 823 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 DIRAS1O95057 198 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 BMP1P13497 986 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 HOXD9P28356 352 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 HOXC8P31273 242 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 TRAF3Q13114 568 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 PARP15Q460N3 678 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 VARS2Q5ST30 1063 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 GDF6Q6KF10 455 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 SUSD1Q6UWL2 747 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 MILR1Q7Z6M3 343 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 GALNT10Q86SR1 603 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 SLC22A16Q86VW1 577 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 SVOPLQ8N434 492 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 LIX1Q8N485 282 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 ARL10Q8N8L6 244 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 OR5K1Q8NHB7 308 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 GTF3C2Q8WUA4 911 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 RIBC2Q9H4K1 309 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 NSUN3Q9H649 340 aaKnown RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 IPPKQ9H8X2 491 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 VPS51Q9UID3 782 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 C3orf18Q9UK00 162 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 COMMD10Q9Y6G5 202 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 VWA8A3KMH1 1905 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 TTC36A6NLP5 189 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 CREG1O75629 220 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 EPOP01588 193 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 MYCLP1P12525 358 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 PSMB9P28065 219 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 EPHA2P29317 976 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 CPT1AP50416 773 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 TRIP4Q15650 581 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 NPTX1Q15818 432 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 CARD16Q5EG05 197 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 C10orf120Q5SQS8 335 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 LDLRAD1Q5T700 205 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 FRA10AC1Q70Z53 315 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 CEP68Q76N32 757 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 ADCK1Q86TW2 530 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 ANKRD46Q86W74 232 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 LGI2Q8N0V4 545 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 RORBQ92753 470 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 VMP1Q96GC9 406 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 SPON2Q9BUD6 331 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 KLHL25Q9H0H3 589 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 ELOVL2Q9NXB9 296 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 SCHIP1Q9P0W5 487 aaPredicted RBP11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 SLCO3A1Q9UIG8 710 aa11.51□□□□□ -0.57
PDZRN3-203ENST00000462146 DRGXA6NNA5 263 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 OXSR1O95747 527 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 MT-ND2P03891 347 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 CA5AP35218 305 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 RCVRNP35243 200 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 CLK3P49761 638 aaKnown RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 KCNQ1P51787 676 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PHC1P78364 1004 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 EPS8Q12929 822 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 GBX1Q14549 363 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 CES5AQ6NT32 575 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 SBSNQ6UWP8 590 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 MICU2Q8IYU8 434 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 SLC7A5P1Q8MH63 180 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 ZCCHC7Q8N3Z6 543 aaKnown RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 ZNF513Q8N8E2 541 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 ATAD1Q8NBU5 361 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 DYNC2LI1Q8TCX1 351 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 UBE2FQ969M7 185 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 MTFMTQ96DP5 389 aaKnown RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 YIPF6Q96EC8 236 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 SUSD3Q96L08 255 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 ZNF300Q96RE9 604 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 DCAF13Q9NV06 445 aaKnown RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 MARCH2Q9P0N8 246 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 TSC22D4Q9Y3Q8 395 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PKP3Q9Y446 797 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 GPC6Q9Y625 555 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PGRP06401 933 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 CLCN7P51798 805 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 SLC13A2Q13183 592 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 TUSC3Q13454 348 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 TOP3AQ13472 1001 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 TAF1AQ15573 450 aaPredicted RBP11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 RUNDC3AQ59EK9 446 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 AGAP7PQ5VUJ5 663 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PLEKHG7Q6ZR37 379 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PRR23BQ6ZRT6 265 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 TAS2R42Q7RTR8 314 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PIK3C3Q8NEB9 887 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 OR6Q1Q8NGQ2 317 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PYCR2Q96C36 320 aa11.5□□□□□ -0.57
PDZRN3-203ENST00000462146 PSD2Q9BQI7 771 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms