RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 PVRP15151 417 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 LAMB3Q13751 1172 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 CCDC38Q502W7 563 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 ADGRF3Q8IZF5 1079 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 ENDOVQ8N8Q3 282 aaKnown RBP20.39■□□□□ 0.85
VSX1-206ENST00000444511 OR52K1Q8NGK4 314 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 ATG4AQ8WYN0 398 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.39■□□□□ 0.85
VSX1-206ENST00000444511 HES6Q96HZ4 224 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 TRAPPC9Q96Q05 1148 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 KLHL25Q9H0H3 589 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 ACSS2Q9NR19 701 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 ACTR10Q9NZ32 417 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 ASF1AQ9Y294 204 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 PRSS21Q9Y6M0 314 aa20.39■□□□□ 0.85
VSX1-206ENST00000444511 HECTD1Q9ULT8 2610 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 CCDC162PA2VCL2 907 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 OR51F1A6NGY5 319 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 ERI2A8K979 691 aaKnown RBP20.38■□□□□ 0.85
VSX1-206ENST00000444511 RAB40ALP0C0E4 278 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 PSMA3P25788 255 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 STIP1P31948 543 aaKnown RBP20.38■□□□□ 0.85
VSX1-206ENST00000444511 RORAP35398 523 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 ITGA1P56199 1179 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 CDH17Q12864 832 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 CHAF1BQ13112 559 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 BRD3Q15059 726 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 SYTL3Q4VX76 610 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 CPZQ66K79 652 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 LCN10Q6JVE6 187 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 PACS1Q6VY07 963 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 OR5AR1Q8NGP9 310 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 NLNQ9BYT8 704 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 PCMTD2Q9NV79 361 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 ICKQ9UPZ9 632 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 PLAAQ9Y263 795 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 CAPN6Q9Y6Q1 641 aa20.38■□□□□ 0.85
VSX1-206ENST00000444511 E7EQ34 232 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 PDGFAP04085 211 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 OR56A5P0C7T3 313 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 FOXN2P32314 431 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 SHMT2P34897 504 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 CCL11P51671 97 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 PGDP52209 483 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 ZNF789Q5FWF6 425 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 SEL1L2Q5TEA6 688 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 SPESP1Q6UW49 350 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 PPP1R21Q6ZMI0 780 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 SYTL1Q8IYJ3 562 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 N4BP2L2Q92802 583 aaPredicted RBP20.37■□□□□ 0.85
VSX1-206ENST00000444511 TTC1Q99614 292 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 SLC25A23Q9BV35 468 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 ING2Q9H160 280 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 POLG2Q9UHN1 485 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 TCFL5Q9UL49 500 aa20.37■□□□□ 0.85
VSX1-206ENST00000444511 TDRKHQ9Y2W6 561 aaKnown RBP20.37■□□□□ 0.85
VSX1-206ENST00000444511 HEATR9A2RTY3 570 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 E7EVH7 732 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 F8W8V4 182 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 IFNB1P01574 187 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 FDFT1P37268 417 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 PTGIRP43119 386 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 MLLT10P55197 1068 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 PTCHD3Q3KNS1 767 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 LYPLAL1Q5VWZ2 237 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 UNC5AQ6ZN44 842 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 CDHR3Q6ZTQ4 885 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 ATCAYQ86WG3 371 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 TBC1D21Q8IYX1 336 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 GPR135Q8IZ08 494 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 HDAC10Q969S8 669 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 FRMD8P1Q9BZ68 369 aaPredicted RBP20.36■□□□□ 0.85
VSX1-206ENST00000444511 ETNK1Q9HBU6 452 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 IMPACTQ9P2X3 320 aa20.36■□□□□ 0.85
VSX1-206ENST00000444511 ZNF749O43361 778 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 LIASO43766 372 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 HBQ1P09105 142 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 UGT2B7P16662 529 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 ACADLP28330 430 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 PLOD1Q02809 727 aaPredicted RBP20.35■□□□□ 0.85
VSX1-206ENST00000444511 UBAP2LQ14157 1087 aaKnown RBP20.35■□□□□ 0.85
VSX1-206ENST00000444511 AFTPHQ6ULP2 937 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 FAM198BQ6UWH4 519 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 NAPRTQ6XQN6 538 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 TRIM73Q86UV7 250 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 RNF10Q8N5U6 811 aaKnown RBP20.35■□□□□ 0.85
VSX1-206ENST00000444511 C19orf47Q8N9M1 422 aaKnown RBP20.35■□□□□ 0.85
VSX1-206ENST00000444511 SPC24Q8NBT2 197 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 OR13J1Q8NGT2 312 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 ADAMTS17Q8TE56 1095 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 COL26A1Q96A83 441 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 MIB2Q96AX9 1013 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 DPH2Q9BQC3 489 aaPredicted RBP20.35■□□□□ 0.85
VSX1-206ENST00000444511 ZNF148Q9UQR1 794 aa20.35■□□□□ 0.85
VSX1-206ENST00000444511 PCDHGA9Q9Y5G4 932 aaKnown RBP20.35■□□□□ 0.85
VSX1-206ENST00000444511 SLC5A10A0PJK1 596 aa20.34■□□□□ 0.85
VSX1-206ENST00000444511 C9J4A7 227 aa20.34■□□□□ 0.85
VSX1-206ENST00000444511 KDM1AO60341 852 aa20.34■□□□□ 0.85
VSX1-206ENST00000444511 SUN1O94901 812 aa20.34■□□□□ 0.85
VSX1-206ENST00000444511 GOT2P00505 430 aaKnown RBP20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms