RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 FAM193BQ96PV7 902 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 VPS35Q96QK1 796 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ATG10Q9H0Y0 220 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ATP13A3Q9H7F0 1226 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 KLHL1Q9NR64 748 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 MAT2BQ9NZL9 334 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ACTR3BQ9P1U1 418 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CARD8Q9Y2G2 431 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 HSPB11Q9Y547 144 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 DOCK5Q9H7D0 1870 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 A0A1B0GVC2 190 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ELOVL7A1L3X0 281 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CCDC162PA2VCL2 907 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CCDC182A6NF36 153 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 A6NIN4 97 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CXCR6O00574 342 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 OR1I1O60431 355 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 TOXO94900 526 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SOX14O95416 240 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 OR1G1P47890 313 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 TIGD6Q17RP2 521 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CATSPEREQ5SY80 951 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 C9orf57Q5W0N0 161 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 DOK6Q6PKX4 331 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CYP20A1Q6UW02 462 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 MBOAT1Q6ZNC8 495 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 PLEKHG7Q6ZR37 379 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 C16orf62Q7Z3J2 963 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 VANGL1Q8TAA9 524 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 TRUB1Q8WWH5 349 aaKnown RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 PIGKQ92643 395 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 KAT8Q9H7Z6 458 aaKnown RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 AASDHPPTQ9NRN7 309 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 MTMR10Q9NXD2 777 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 COMMD3Q9UBI1 195 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SHROOM3Q8TF72 1996 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ZNF236Q9UL36 1845 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SMIM28A0A1B0GU29 152 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 PDE9AO76083 593 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 KRT6AP02538 564 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 KRT6BP04259 564 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 PSKH1P11801 424 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 HOXD10P28358 340 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CDKN1CP49918 316 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 PYCR3Q53H96 274 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CYBRD1Q53TN4 286 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SPOUT1Q5T280 376 aaKnown RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 TRIQKQ629K1 86 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 OVOS1Q6IE37 1185 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 LIX1Q8N485 282 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 S100ZQ8WXG8 99 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 PTERQ96BW5 349 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 DIRAS2Q96HU8 199 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 GPR20Q99678 358 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ZNF717Q9BY31 904 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 TMEM245Q9H330 911 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 NUFIP1Q9UHK0 495 aaKnown RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 CRLS1Q9UJA2 301 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 PTCH2Q9Y6C5 1203 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 LRRC37A2A6NM11 1700 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 TMEM221A6NGB7 291 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 I3L521 148 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SLC1A7O00341 560 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 RFXANKO14593 260 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SMAD9O15198 467 aaKnown RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 ZW10O43264 779 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 RAMP2O60895 175 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 MYF6P23409 242 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 HTR2BP41595 481 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ALDH9A1P49189 494 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 HLCSP50747 726 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 AQP6Q13520 282 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 HERC3Q15034 1050 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 MAMDC4Q6UXC1 1216 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 DCP1BQ8IZD4 617 aaKnown RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 OR8H3Q8N146 312 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SH3RF2Q8TEC5 729 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 CINPQ9BW66 212 aaPredicted RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 CRISPLD1Q9H336 500 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 IPPKQ9H8X2 491 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 TRAV19A0A0A6YYK7 116 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 SAGE2PA6NJ88 616 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 C12orf71A8MTZ7 269 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 A8MUA0 341 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 UBFD1O14562 309 aaKnown RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 RFPL2O75678 378 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 PFKMP08237 780 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 CCNYL3P0C7X3 344 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 CLCN5P51795 746 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 BLVRAP53004 296 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 CDH12P55289 794 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 CSTF3Q12996 717 aaKnown RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 BTG3Q14201 252 aaPredicted RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 AKIRIN2Q53H80 203 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 ASB18Q6ZVZ8 466 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 CYP4V2Q6ZWL3 525 aaPredicted RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 ZNF467Q7Z7K2 595 aaPredicted RBP8.66□□□□□ -1.02
RTN4-206ENST00000394611 NELL1Q92832 810 aa8.66□□□□□ -1.02
RTN4-206ENST00000394611 HMCESQ96FZ2 354 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms