RNA–Protein interactions for RNA: ENST00000380821.7

SNAPC3-202, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC3, Length 5,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-202ENST00000380821 AZIN2Q96A70 460 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 NFAT5O94916 1531 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 CDC40O60508 579 aaKnown RBP eCLIP16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 YAP1P46937 504 aaKnown RBP16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 ARCN1P48444 511 aaKnown RBP16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 CXCL17Q6UXB2 119 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 CADM2Q8N3J6 435 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 OR10G2Q8NGC3 310 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 LRRC58Q96CX6 371 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 FEM1CQ96JP0 617 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 TMEM209Q96SK2 561 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 MTFR1LQ9H019 292 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 TVP23BQ9NYZ1 205 aa16.83■□□□□ 0.29
SNAPC3-202ENST00000380821 WRBO00258 174 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 PDPK1O15530 556 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 C1RP00736 705 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 CBLBQ13191 982 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 MOGQ16653 247 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 KIAA1324Q6UXG2 1013 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 IQCF2Q8IXL9 164 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 CCDC107Q8WV48 283 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 STON2Q8WXE9 905 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 NDRG1Q92597 394 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 PIWIL1Q96J94 861 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 MND1Q9BWT6 205 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 RC3H2Q9HBD1 1191 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 DMAC2Q9NW81 257 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 PTBP2Q9UKA9 531 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 MRPS23Q9Y3D9 190 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 COLEC10Q9Y6Z7 277 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 MTHFD1P11586 935 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 POU2F1P14859 743 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 IST1P53990 364 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 GNA12Q03113 381 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 CSTF1Q05048 431 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 HEPACAMQ14CZ8 416 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 TTPALQ9BTX7 342 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 PCDHAC1Q9H158 963 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 TCF7L1Q9HCS4 588 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 PHPT1Q9NRX4 125 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 TBCCD1Q9NVR7 557 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 ZIM2Q9NZV7 527 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 EVLQ9UI08 416 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 POFUT2Q9Y2G5 429 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 NR2E1Q9Y466 385 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 MAFBQ9Y5Q3 323 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 NEDD8-MDP1E9PL57 170 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 TSPAN1O60635 241 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 SRPRAP08240 638 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 RIPPLY1Q0D2K3 151 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 SCARB2Q14108 478 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 CERS5Q8N5B7 392 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 OR10H4Q8NGA5 316 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 PCDH19Q8TAB3 1148 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 DUSP26Q9BV47 211 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 POLR2J2Q9GZM3 115 aaKnown RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 CFAP97Q9P2B7 532 aa16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 ZFP37Q9Y6Q3 630 aaPredicted RBP16.83■□□□□ 0.28
SNAPC3-202ENST00000380821 AOC1P19801 751 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 SF1Q15637 639 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 DPYSL2Q16555 572 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 SLC51AQ86UW1 340 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 SIPA1Q96FS4 1042 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 COMMD3Q9UBI1 195 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 ITM2AO43736 263 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 SCGNO76038 276 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 MYCLP1P12525 358 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 NT5EP21589 574 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 ASPAP45381 313 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 MAP2K5Q13163 448 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 HNRNPDQ14103 355 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 GPR153Q6NV75 609 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 TAC4Q86UU9 113 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 SNX27Q96L92 541 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 ATG10Q9H0Y0 220 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 KANTRA0A1W2PQU2 76 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 FAM159BA6NKW6 160 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 AKAP8O43823 692 aaKnown RBP16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 PEX14O75381 377 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 MMP3P08254 477 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 HSPB3Q12988 150 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 ZNF234Q14588 700 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 ZFAND2BQ8WV99 257 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 PLD4Q96BZ4 506 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 C5orf34Q96MH7 638 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 ZNF317Q96PQ6 595 aaPredicted RBP16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 PCDHGB1Q9Y5G3 927 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 TARDBPQ13148 414 aaKnown RBP eCLIP16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 TPRG1LQ5T0D9 272 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 CYP2U1Q7Z449 544 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 C15orf40Q8WUR7 153 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 TFAP2BQ92481 460 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 PPM1HQ9ULR3 514 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 PCDHGA11Q9Y5H2 935 aa16.82■□□□□ 0.28
SNAPC3-202ENST00000380821 DAPL1A0PJW8 107 aa16.81■□□□□ 0.28
SNAPC3-202ENST00000380821 TMEM63AO94886 807 aa16.81■□□□□ 0.28
SNAPC3-202ENST00000380821 PPM1AP35813 382 aa16.81■□□□□ 0.28
SNAPC3-202ENST00000380821 ZNF548Q8NEK5 533 aaPredicted RBP16.81■□□□□ 0.28
SNAPC3-202ENST00000380821 ACBD6Q9BR61 282 aa16.81■□□□□ 0.28
SNAPC3-202ENST00000380821 TMEM9Q9P0T7 183 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms