RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 GDF5P43026 501 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 ERVPABLB-1P60509 514 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 PRPF38BQ5VTL8 546 aaKnown RBP17.73■□□□□ 0.43
VIM-201ENST00000224237 CHSY3Q70JA7 882 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 LARP4Q71RC2 724 aaKnown RBP eCLIP17.73■□□□□ 0.43
VIM-201ENST00000224237 LRRC70Q7Z2Q7 622 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 HORMAD1Q86X24 394 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 CFAP206Q8IYR0 622 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 OR2L2Q8NH16 312 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 HM13Q8TCT9 377 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 SLC17A9Q9BYT1 436 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 SLC32A1Q9H598 525 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 CD93Q9NPY3 652 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 PRDM6Q9NQX0 595 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 TIMM22Q9Y584 194 aa17.73■□□□□ 0.43
VIM-201ENST00000224237 COL6A3P12111 3177 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3DA0A087WVF3 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3IA0A087WXS9 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3EA0A087X179 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3KA0A087X1G2 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3FA6NER0 549 aaPredicted RBP17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3LB9A6J9 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 GYG2O15488 501 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 VPS4BO75351 444 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 POP7O75817 140 aaKnown RBP17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3HP0C7X1 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 CPA2P48052 419 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 ABRQ12979 859 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TRAF3Q13114 568 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 INPP5AQ14642 412 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 NAA25Q14CX7 972 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 FAM219BQ5XKK7 198 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3GQ6DHY5 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3CQ6IPX1 549 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 LETMD1Q6P1Q0 360 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 CRTC3Q6UUV7 619 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TMEM92Q6UXU6 159 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 HOMEZQ8IX15 550 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D3Q8IZP1 549 aaPredicted RBP17.72■□□□□ 0.43
VIM-201ENST00000224237 OR4F6Q8NGB9 312 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 C3orf30Q96M34 536 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 CDK15Q96Q40 435 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 LGR4Q9BXB1 951 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TBC1D10AQ9BXI6 508 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 OSBPL6Q9BZF3 934 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 DPEP2Q9H4A9 486 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TUBB1Q9H4B7 451 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 TMEM98Q9Y2Y6 226 aa17.72■□□□□ 0.43
VIM-201ENST00000224237 ATP6AP2A0A1C7CYW4 349 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 MGAT4DA6NG13 374 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 ARHGEF33A8MVX0 844 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 MAN2B1O00754 1011 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 UBDO15205 165 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 ATP6AP2O75787 350 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 DOK6Q6PKX4 331 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 RINLQ6ZS11 566 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 Q6ZS52 159 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 MILR1Q7Z6M3 343 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 C11orf96Q7Z7L8 435 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 LRRTM4Q86VH4 590 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 CDYL2Q8N8U2 506 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 DCBLD1Q8N8Z6 715 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 CFAP61Q8NHU2 1237 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 KLK6Q92876 244 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 NTMT1Q9BV86 223 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 PHPT1Q9NRX4 125 aaPredicted RBP17.71■□□□□ 0.43
VIM-201ENST00000224237 TAS2R1Q9NYW7 299 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 G3BP2Q9UN86 482 aaKnown RBP17.71■□□□□ 0.43
VIM-201ENST00000224237 BTRCQ9Y297 605 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 ST14Q9Y5Y6 855 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 COPG1Q9Y678 874 aaKnown RBP17.71■□□□□ 0.43
VIM-201ENST00000224237 B2RBV5 119 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 KRT16P08779 473 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 NDUFV2P19404 249 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 PIK3R1P27986 724 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 PDHA2P29803 388 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 SLC6A12P48065 614 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 KIAA1324Q6UXG2 1013 aaKnown RBP17.71■□□□□ 0.43
VIM-201ENST00000224237 METTL6Q8TCB7 284 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 ATL1Q8WXF7 558 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 FBXL8Q96CD0 374 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 C1orf21Q9H246 121 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 AKTIPQ9H8T0 292 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 CA14Q9ULX7 337 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 PTGDR2Q9Y5Y4 395 aa17.71■□□□□ 0.43
VIM-201ENST00000224237 DNMT3AQ9Y6K1 912 aaPredicted RBP17.71■□□□□ 0.43
VIM-201ENST00000224237 ZFC3H1O60293 1989 aaKnown RBP17.7■□□□□ 0.42
VIM-201ENST00000224237 TCRBV21S2A2A0A5A6 115 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 CAPN1P07384 714 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 LINC00032P0C843 101 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 EBLN1P0CF75 366 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 MYCLP1P12525 358 aaPredicted RBP17.7■□□□□ 0.42
VIM-201ENST00000224237 SQLEQ14534 574 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 MLF2Q15773 248 aaPredicted RBP17.7■□□□□ 0.42
VIM-201ENST00000224237 XKR7Q5GH72 579 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.7■□□□□ 0.42
VIM-201ENST00000224237 CYB5D1Q6P9G0 228 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 FAM124AQ86V42 546 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 AMZ2Q86W34 360 aa17.7■□□□□ 0.42
VIM-201ENST00000224237 POU5F2Q8N7G0 328 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms