RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 RFPL2O75678 378 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 ACSL3O95573 720 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 MPZP25189 248 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 RFX2P48378 723 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 ST8SIA6P61647 398 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 PDE1BQ01064 536 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 ROR2Q01974 943 aaKnown RBP4.91□□□□□ -1.62
LINC00397-202ENST00000606785 SMC1AQ14683 1233 aaKnown RBP4.91□□□□□ -1.62
LINC00397-202ENST00000606785 TAZQ16635 292 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 KBTBD12Q3ZCT8 623 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 SLC39A12Q504Y0 691 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 MFSD12Q6NUT3 480 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 SLC27A1Q6PCB7 646 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 CNSTQ6PJW8 725 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 ENPP7Q6UWV6 458 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 EGFL6Q8IUX8 553 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 MAP7D3Q8IWC1 876 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 C4orf19Q8IY42 314 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 ZNF34Q8IZ26 560 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 UXS1Q8NBZ7 420 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 DBF4BQ8NFT6 615 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 OR52I2Q8NH67 350 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 SPATA20Q8TB22 786 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 CHFRQ96EP1 664 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 SLC25A33Q9BSK2 321 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 GTPBP2Q9BX10 602 aaKnown RBP4.91□□□□□ -1.62
LINC00397-202ENST00000606785 CACNG6Q9BXT2 260 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 ZNF350Q9GZX5 532 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 MINDY3Q9H8M7 445 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 LMAN1LQ9HAT1 526 aa4.91□□□□□ -1.62
LINC00397-202ENST00000606785 DNAJC17Q9NVM6 304 aaKnown RBP4.91□□□□□ -1.62
LINC00397-202ENST00000606785 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.91□□□□□ -1.62
LINC00397-202ENST00000606785 CKAP5Q14008 2032 aa4.9□□□□□ -1.62
LINC00397-202ENST00000606785 NEMP2A6NFY4 417 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 EIF3DO15371 548 aaKnown RBP eCLIP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 ST8SIA3O43173 380 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 ZBTB14O43829 449 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 OLFM2O95897 454 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 LDLRP01130 860 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 ITIH1P19827 911 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 CORO1AP31146 461 aaKnown RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 ANP32AP39687 249 aaKnown RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 KHKP50053 298 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 MAPK12P53778 367 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 UBASH3AP57075 661 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 COG7P83436 770 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 TEFQ10587 303 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 PNRC1Q12796 327 aaPredicted RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 OASLQ15646 514 aaKnown RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 FAM174BQ3ZCQ3 159 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 TCTE1Q5JU00 501 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 EFHC1Q5JVL4 640 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 MORN5Q5VZ52 161 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 TXNRD3NBQ6F5E7 133 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 NOTUMQ6P988 496 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 TMEM270Q6UE05 265 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 GLCCI1Q86VQ1 547 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 PRIMA1Q86XR5 153 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 CLYBLQ8N0X4 340 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 ZNF619Q8N2I2 560 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 NANOGP1Q8N7R0 232 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 SLC38A5Q8WUX1 472 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 SEPT1Q8WYJ6 367 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 WASF1Q92558 559 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 PIGTQ969N2 578 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 SPATA33Q96N06 139 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 HNRNPABQ99729 332 aaKnown RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 IARS2Q9NSE4 1012 aaKnown RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 KLHL9Q9P2J3 617 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 ODF2LQ9ULJ1 636 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 YIPF1Q9Y548 306 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 SNX9Q9Y5X1 595 aa4.9□□□□□ -1.63
LINC00397-202ENST00000606785 WDR33Q9C0J8 1336 aaKnown RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 CENPJQ9HC77 1338 aaPredicted RBP4.9□□□□□ -1.63
LINC00397-202ENST00000606785 A0A0U1RQJ8 604 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 A0A1B0GVT2 93 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 FAM90A10PA6NDY2 464 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 INAFM1C9JVW0 142 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 TMEM178BH3BS89 294 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 PGRMC2O15173 223 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 BUD23O43709 281 aaKnown RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 SELENOFO60613 162 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 SERPINI2O75830 405 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 PGLSO95336 258 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 CSN3P07498 182 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 IGHV4-30-4P0DP06 118 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 SAGP10523 405 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 UROSP10746 265 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 S1PR1P21453 382 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 SSTR2P30874 369 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 HOXD3P31249 432 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 MMP13P45452 471 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 GMPSP49915 693 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 TPD52P55327 224 aaPredicted RBP4.89□□□□□ -1.63
LINC00397-202ENST00000606785 TGFB2P61812 414 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 DLK1P80370 383 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 ABATP80404 500 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 CBX3Q13185 183 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 TNK1Q13470 666 aa4.89□□□□□ -1.63
LINC00397-202ENST00000606785 FUT11Q495W5 492 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms