RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 UGT1A4P22310 534 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 PTPN4P29074 926 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 COILP38432 576 aaPredicted RBP17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 MLLT10P55197 1068 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 HSD11B2P80365 405 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 BASP1P80723 227 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 CYP1B1Q16678 543 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 METRNLQ641Q3 311 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 CARFQ8N187 725 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 OR52K1Q8NGK4 314 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 GRK7Q8WTQ7 553 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 STYXQ8WUJ0 223 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 ULK4Q96C45 1275 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 UGT1A7Q9HAW7 530 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 UGT1A10Q9HAW8 530 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 UGT1A8Q9HAW9 530 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 KCND1Q9NSA2 647 aa17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.1■□□□□ 0.33
SHKBP1-203ENST00000594298 FLNCQ14315 2725 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 KLHL33A6NCF5 533 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 GPR39O43194 453 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 PRAMEF1O95521 474 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 CA5AP35218 305 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 TUBB4BP68371 445 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 SARNPP82979 210 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 CDK16Q00536 496 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 TUBB2AQ13885 445 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 NFE2L1Q14494 772 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 POU6F1Q14863 301 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 PLCL1Q15111 1095 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 DNTTIP2Q5QJE6 756 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 GPRC6AQ5T6X5 926 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 PAPD7Q5XG87 772 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 CCDC137Q6PK04 289 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 TMEM220Q6QAJ8 160 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 ZNF517Q6ZMY9 492 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 NLRP9Q7RTR0 991 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 PRUNE1Q86TP1 453 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 GLIS1Q8NBF1 620 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 OR8K5Q8NH50 307 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 HEXDCQ8WVB3 486 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 RUFY1Q96T51 708 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 TUBB2BQ9BVA1 445 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 TRIM55Q9BYV6 548 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 ASB8Q9H765 288 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 AKIRIN1Q9H9L7 192 aaPredicted RBP17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 MLXIPLQ9NP71 852 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 FKBPLQ9UIM3 349 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 PSMD13Q9UNM6 376 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 SAR1BQ9Y6B6 198 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 DOPEY2Q9Y3R5 2298 aa17.09■□□□□ 0.33
SHKBP1-203ENST00000594298 SPENQ96T58 3664 aaKnown RBP17.08■□□□□ 0.33
SHKBP1-203ENST00000594298 UBA6A0AVT1 1052 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 HEATR9A2RTY3 570 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 OR2AG2A6NM03 316 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 LDB2O43679 373 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 CPNE3O75131 537 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 PHF2O75151 1096 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 DNAJB5O75953 348 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 SRP72O76094 671 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 ZBTB11O95625 1053 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 KRT14P02533 472 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 MSH3P20585 1137 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 ITGALP20701 1170 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 FNTAP49354 379 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 ARL4DP49703 201 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 ZNF140P52738 457 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 RPS15P62841 145 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 TMPRSS15P98073 1019 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 PTPRCAPQ14761 206 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 GPR33Q49SQ1 333 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 IZUMO3Q5VZ72 239 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 FAM199XQ6PEV8 388 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 CERS6Q6ZMG9 384 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 OOSP2Q86WS3 158 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 BEND7Q8N7W2 519 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 OR13C4Q8NGS5 318 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 ZNF501Q96CX3 271 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 LRFN5Q96NI6 719 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 CASS4Q9NQ75 786 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 LATS2Q9NRM7 1088 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 IMP3Q9NV31 184 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 NLE1Q9NVX2 485 aaPredicted RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 HRASLS2Q9NWW9 162 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 RNF14Q9UBS8 474 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 ACSL5Q9ULC5 683 aa17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 PCDHGA9Q9Y5G4 932 aaKnown RBP17.08■□□□□ 0.32
SHKBP1-203ENST00000594298 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 MGAT4DA6NG13 374 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 SCRG1O75711 98 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 RALBP11234 206 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 ADRA1DP25100 572 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 RPS18P62269 152 aaKnown RBP17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 XIAPP98170 497 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 SNX20Q7Z614 316 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 GALNT11Q8NCW6 608 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 OR2L2Q8NH16 312 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 DCUN1D1Q96GG9 259 aa17.07■□□□□ 0.32
SHKBP1-203ENST00000594298 RANBP9Q96S59 729 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms