RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 GPR26Q8NDV2 337 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ERLEC1Q96DZ1 483 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 FBXL20Q96IG2 436 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 KCTD14Q9BQ13 255 aaPredicted RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 RNF208Q9H0X6 261 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ATP11BQ9Y2G3 1177 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 DHRS7Q9Y394 339 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 DLGAP1O14490 977 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 STX16O14662 325 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 CHEK2O96017 543 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 C1QCP02747 245 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 ESR1P03372 595 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 BCL2L1Q07817 233 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 NFATC2Q13469 925 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 AP5B1Q2VPB7 878 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 C16orf87Q6PH81 154 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 MINDY1Q8N5J2 469 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 OR10Q1Q8NGQ4 319 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 SKA2Q8WVK7 121 aaPredicted RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 PYCR2Q96C36 320 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 SMOXQ9NWM0 555 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 HCFC1R1Q9NWW0 138 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 TRNAU1APQ9NX07 287 aaKnown RBP14.51□□□□□ -0.09
DDX55-209ENST00000542286 CRLS1Q9UJA2 301 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 UTS2RQ9UKP6 389 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 TMED5Q9Y3A6 229 aa14.51□□□□□ -0.09
DDX55-209ENST00000542286 MATN4O95460 622 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 HSPA8P11142 646 aaKnown RBP14.5□□□□□ -0.09
DDX55-209ENST00000542286 SLC2A4P14672 509 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 HACD2Q6Y1H2 254 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 ERMP1Q7Z2K6 904 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 SLC22A17Q8WUG5 538 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 MTG2Q9H4K7 406 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 LTB4R2Q9NPC1 389 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 HACD3Q9P035 362 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 KLQ9UEF7 1012 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 TANC1Q9C0D5 1861 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 MLYCDO95822 493 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 TRBC1P01850 177 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 HRH2P25021 359 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 ERVK-8P63133 956 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 TRAF3Q13114 568 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 GTDC1Q4AE62 458 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 ZNF362Q5T0B9 420 aaPredicted RBP14.5□□□□□ -0.09
DDX55-209ENST00000542286 ZNF648Q5T619 568 aaPredicted RBP14.5□□□□□ -0.09
DDX55-209ENST00000542286 TBPL2Q6SJ96 375 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 CCDC80Q76M96 950 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 CHST15Q7LFX5 561 aaPredicted RBP14.5□□□□□ -0.09
DDX55-209ENST00000542286 MILR1Q7Z6M3 343 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 FAM86B1Q8N7N1 296 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 HJURPQ8NCD3 748 aaPredicted RBP14.5□□□□□ -0.09
DDX55-209ENST00000542286 TBC1D15Q8TC07 691 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 HOPXQ9BPY8 73 aaPredicted RBP14.5□□□□□ -0.09
DDX55-209ENST00000542286 IKZF5Q9H5V7 419 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 CCM2LQ9NUG4 571 aaPredicted RBP14.5□□□□□ -0.09
DDX55-209ENST00000542286 ABCB8Q9NUT2 735 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 SLCO3A1Q9UIG8 710 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 CDH7Q9ULB5 785 aa14.5□□□□□ -0.09
DDX55-209ENST00000542286 RNF103-CHMP3A0A140T963 221 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 A0A1W2PQ67 120 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 BBIP1A8MTZ0 92 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 NEK2P51955 445 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 ARHGEF7Q14155 803 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 ANKRD34AQ69YU3 496 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 CYP20A1Q6UW02 462 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 TMEM199Q8N511 208 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 SLAIN1Q8ND83 568 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 FOXJ1Q92949 421 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 GID8Q9NWU2 228 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 FAM32AQ9Y421 112 aaKnown RBP14.49□□□□□ -0.09
DDX55-209ENST00000542286 A0A087WXM4 84 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 SOBPA7XYQ1 873 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 ZNF701M0R085 212 aaPredicted RBP14.49□□□□□ -0.09
DDX55-209ENST00000542286 EI24O14681 340 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 LSM1O15116 133 aaKnown RBP14.49□□□□□ -0.09
DDX55-209ENST00000542286 DFNA5O60443 496 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 URODP06132 367 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 GSTT2P0CG29 244 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 GSTT2BP0CG30 244 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 CDH3P22223 829 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 YAP1P46937 504 aaKnown RBP14.49□□□□□ -0.09
DDX55-209ENST00000542286 IST1P53990 364 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 EPHB3P54753 998 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 ZXDCQ2QGD7 858 aaPredicted RBP14.49□□□□□ -0.09
DDX55-209ENST00000542286 SLC39A11Q8N1S5 342 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 CYGBQ8WWM9 190 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 VOPP1Q96AW1 172 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 HEPHQ9BQS7 1158 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 TBCDQ9BTW9 1192 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 WWOXQ9NZC7 414 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 SUN2Q9UH99 717 aa14.49□□□□□ -0.09
DDX55-209ENST00000542286 SPTBN5Q9NRC6 3674 aaKnown RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 GLYATL1P3A0A0U1RQE8 302 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 A0A1W2PPW3 197 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 PSMA4P25789 261 aaKnown RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 CLCN4P51793 760 aa14.48□□□□□ -0.09
DDX55-209ENST00000542286 CPSF6Q16630 551 aaKnown RBP eCLIP14.48□□□□□ -0.09
DDX55-209ENST00000542286 ZIK1Q3SY52 487 aaPredicted RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 INO80DQ53TQ3 878 aaPredicted RBP14.48□□□□□ -0.09
DDX55-209ENST00000542286 NHSL2Q5HYW2 709 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 262.1 ms