RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 SERPINB11Q96P15 392 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 ZBTB18Q99592 522 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 NLE1Q9NVX2 485 aaPredicted RBP17.45■□□□□ 0.38
NUP54-205ENST00000507257 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.45■□□□□ 0.38
NUP54-205ENST00000507257 KCNH4Q9UQ05 1017 aa17.45■□□□□ 0.38
NUP54-205ENST00000507257 TRBV5-3A0A0A0MS03 114 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 OR2A25A4D2G3 310 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 NPEPPSL1A6NEC2 478 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 AGAP5A6NIR3 686 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 BTN3A1O00481 513 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 CREG1O75629 220 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 TSPAN12O95859 305 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 FTH1P02794 183 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 MT-ND2P03891 347 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 PSMB9P28065 219 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 MAP2K4P45985 399 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 DGKQP52824 942 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 IL10RBQ08334 325 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 MAD2L1Q13257 205 aaPredicted RBP17.44■□□□□ 0.38
NUP54-205ENST00000507257 LAPTM5Q13571 262 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 PCBP2Q15366 365 aaKnown RBP eCLIP17.44■□□□□ 0.382e-6■■■■■ 27.6
NUP54-205ENST00000507257 CPZQ66K79 652 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 PNCKQ6P2M8 343 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 GPSM1Q86YR5 675 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 CDYL2Q8N8U2 506 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 ZHX1-C8orf76Q96EF9 292 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 PKMYT1Q99640 499 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 RTP3Q9BQQ7 232 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 PCDH12Q9NPG4 1184 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 POLE4Q9NR33 117 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 ASIC5Q9NY37 505 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 NUDT4Q9NZJ9 180 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 RBMX2Q9Y388 322 aaKnown RBP17.44■□□□□ 0.38
NUP54-205ENST00000507257 NOX1Q9Y5S8 564 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 ARL5AQ9Y689 179 aa17.44■□□□□ 0.38
NUP54-205ENST00000507257 ENPP3O14638 875 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 KCNK2O95069 426 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 PRKCDQ05655 676 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 TRIP4Q15650 581 aaPredicted RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 MAPK11Q15759 364 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 KDM4DQ6B0I6 523 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 LETMD1Q6P1Q0 360 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 AFTPHQ6ULP2 937 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 TSPYL5Q86VY4 417 aaPredicted RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 PGBD5Q8N414 524 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 NAT16Q8N8M0 369 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 SLC38A4Q969I6 547 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 PDLIM5Q96HC4 596 aaKnown RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 PYURFQ96I23 114 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 KLHL5Q96PQ7 755 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 THUMPD3Q9BV44 507 aaKnown RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 ZYG11BQ9C0D3 744 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 FBXO10Q9UK96 956 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 UTS2RQ9UKP6 389 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 TNPO3Q9Y5L0 923 aaKnown RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 POLR2AP24928 1970 aaKnown RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 EFCAB9A8MZ26 197 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 CENPBD1B2RD01 187 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 CA12O43570 354 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 SNX4O95219 450 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 IL6P05231 212 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 SMIM10L2AP0DMW4 78 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 SMIM10L2BP0DMW5 78 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 HAPLN1P10915 354 aaPredicted RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 PFKLP17858 780 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 FSHRP23945 695 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 ALDH4A1P30038 563 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 CASP3P42574 277 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 HK3P52790 923 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 CRYBB1P53674 252 aaPredicted RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 GBX1Q14549 363 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 NR6A1Q15406 480 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 MAPKAPK3Q16644 382 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 AP5B1Q2VPB7 878 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 PIK3R6Q5UE93 754 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 STEAP3Q658P3 488 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 MSRB3Q8IXL7 192 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 OR13C4Q8NGS5 318 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 METTL6Q8TCB7 284 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 BLOC1S5Q8TDH9 187 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 ATL1Q8WXF7 558 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 ERLEC1Q96DZ1 483 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 CEP295NLQ96MC4 621 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 GPR21Q99679 349 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 POLR1EQ9GZS1 481 aaKnown RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 DCSTAMPQ9H295 470 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 TM9SF3Q9HD45 589 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 OPTCQ9UBM4 332 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 EIF2B4Q9UI10 523 aaKnown RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 NDRG4Q9ULP0 352 aaKnown RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 FAM50BQ9Y247 325 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 PKP3Q9Y446 797 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 CCL27Q9Y4X3 112 aa17.43■□□□□ 0.38
NUP54-205ENST00000507257 POLR3HQ9Y535 204 aaPredicted RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 TIMM13Q9Y5L4 95 aaPredicted RBP17.43■□□□□ 0.38
NUP54-205ENST00000507257 IGLV3-10A0A075B6K4 115 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.42■□□□□ 0.38
NUP54-205ENST00000507257 FAM172BPA6NC97 362 aa17.42■□□□□ 0.38
NUP54-205ENST00000507257 E9PQ18 207 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms