RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, human

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMPD4-218	ENST00000482171	EIF2S1	P05198	315 aa	Known RBP	11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	CYP4B1	P13584	511 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	NCK1	P16333	377 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	NTHL1	P78549	312 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	GTF2H2	Q13888	395 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	PDCD4	Q53EL6	469 aa	Known RBP	11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	CARD16	Q5EG05	197 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	REP15	Q6BDI9	236 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	GTF2H2C	Q6P1K8	395 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	CEP97	Q8IW35	865 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	OR14C36	Q8NHC7	312 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	SORCS1	Q8WY21	1168 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	COL26A1	Q96A83	441 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	PANX1	Q96RD7	426 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	IL12RB2	Q99665	862 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	APOL4	Q9BPW4	351 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	WDR12	Q9GZL7	423 aa	Known RBP	11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	AHSP	Q9NZD4	102 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	MTRR	Q9UBK8	725 aa		11.13	□□□□□ -0.63
SMPD4-218	ENST00000482171	SLC31A1	O15431	190 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	FYN	P06241	537 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	SLC35G4	P0C7Q5	338 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	FGF3	P11487	239 aa	Predicted RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CRAT	P43155	626 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	HMGCS1	Q01581	520 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	PLEKHG6	Q3KR16	790 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	MTSS1L	Q765P7	747 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	AKAP14	Q86UN6	197 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	TMEM173	Q86WV6	379 aa	Predicted RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	TXNDC5	Q8NBS9	432 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	S100Z	Q8WXG8	99 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	BAD	Q92934	168 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	PLEKHA8	Q96JA3	519 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	PSKH2	Q96QS6	385 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	KCNA7	Q96RP8	456 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	SERPINI2	O75830	405 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ALDH1A2	O94788	518 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	EPN2	O95208	641 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ADSL	P30566	484 aa	Predicted RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	GNPDA1	P46926	289 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	IDH2	P48735	452 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CDK9	P50750	372 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	RING1	Q06587	406 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ZNF33A	Q06730	810 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	C11orf91	Q3C1V1	193 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	KLHL35	Q6PF15	583 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	MMAA	Q8IVH4	418 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	MCFD2	Q8NI22	146 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	SMIM14	Q96QK8	99 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	FEM1A	Q9BSK4	669 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	TLR9	Q9NR96	1032 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	INTS10	Q9NVR2	710 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171		E7ENX8	843 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	PCCB	P05166	539 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	AQP1	P29972	269 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	NSG1	P42857	185 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	STC1	P52823	247 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ADAM17	P78536	824 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CHIT1	Q13231	466 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ZBED5	Q49AG3	693 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ZNF789	Q5FWF6	425 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	FAM46C	Q5VWP2	391 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CHST15	Q7LFX5	561 aa	Predicted RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ADHFE1	Q8IWW8	467 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	RBM12B	Q8IXT5	1001 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	TBC1D21	Q8IYX1	336 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CPSF7	Q8N684	471 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	AMER2	Q8N7J2	671 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CLP1	Q92989	425 aa	Known RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	RTP4	Q96DX8	246 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CCDC3	Q9BQI4	270 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	EHD3	Q9NZN3	535 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	PNMA8C	A0A1B0GUJ8	204 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	TFEC	O14948	347 aa	Predicted RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ATG13	O75143	517 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	PRNP	P04156	253 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	MERTK	Q12866	999 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	LRRC66	Q68CR7	880 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	NCCRP1	Q6ZVX7	275 aa	Predicted RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	SNX20	Q7Z614	316 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	SCAMP4	Q969E2	229 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	CENPN	Q96H22	339 aa	Predicted RBP	11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	TMEM245	Q9H330	911 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	LRTM1	Q9HBL6	345 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	FNIP2	Q9P278	1114 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	PHF24	Q9UPV7	400 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	NME7	Q9Y5B8	376 aa		11.12	□□□□□ -0.63
SMPD4-218	ENST00000482171	ISM1	B1AKI9	464 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	RFXANK	O14593	260 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	NPHS1	O60500	1241 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	ALOX5	P09917	674 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	IL12A	P29459	219 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	NRIP1	P48552	1158 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	CYP4F3	Q08477	520 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	PPP2R2D	Q66LE6	453 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171		Q6ZVL8	140 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	DCAF4L2	Q8NA75	395 aa		11.11	□□□□□ -0.63
SMPD4-218	ENST00000482171	BBS4	Q96RK4	519 aa		11.11	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms