RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 ZFP14Q9HCL3 533 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 ACTR3BQ9P1U1 418 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 GALPQ9UBC7 116 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 MID2Q9UJV3 735 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 YIPF1Q9Y548 306 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 ZSWIM8A7E2V4 1837 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 TRIOBPQ9H2D6 2365 aa12.15□□□□□ -0.46
USP11-206ENST00000469080 TRIOO75962 3097 aa12.15□□□□□ -0.47
USP11-206ENST00000469080 NEDD8-MDP1E9PL57 170 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 PLOD2O00469 737 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 RAD51BO15315 384 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 SMAD6O43541 496 aaKnown RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 TSHRP16473 764 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 MAGEA3P43357 314 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ST13P50502 369 aaKnown RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 SNTA1Q13424 505 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 FASTKQ14296 549 aaKnown RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 DENND5AQ6IQ26 1287 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 BNC2Q6ZN30 1099 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 SH2D5Q6ZV89 423 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 FKBP9P1Q75LS8 142 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 FBXO39Q8N4B4 442 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 C2orf73Q8N5S3 287 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 BPIFB6Q8NFQ5 453 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ZUFSPQ96AP4 578 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ZNF641Q96N77 438 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 OSBPL11Q9BXB4 747 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 OR2B2Q9GZK3 357 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 COQ10BQ9H8M1 238 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 OLAHQ9NV23 265 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 MRPL39Q9NYK5 338 aaKnown RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 PMF1-BGLAPU3KQ54 211 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 OR6C75A6NL08 312 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 A8MUA0 341 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 A8MV72 311 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 G3V2L1 256 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 DYRK3O43781 588 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 UGT2B4P06133 528 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ATP6V0D1P61421 351 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 RHAGQ02094 409 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 SCAPQ12770 1279 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 PRKAA1Q13131 559 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 IHHQ14623 411 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 LHX8Q68G74 356 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ARCQ7LC44 396 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 CHST15Q7LFX5 561 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 KCTD20Q7Z5Y7 419 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 RASSF5Q8WWW0 418 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ULK4Q96C45 1275 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ZNF347Q96SE7 839 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 ABCB10Q9NRK6 738 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 POLR3BQ9NW08 1133 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 PRKAG2Q9UGJ0 569 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 SNX13Q9Y5W8 968 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 H3BMM5 538 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 INPPL1O15357 1258 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 OAZ2O95190 189 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 PRAMEF12O95522 483 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 HTR2BP41595 481 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 OR3A3P47888 321 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 SEPHS1P49903 392 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 KPNA2P52292 529 aaKnown RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 POU4F1Q01851 419 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 PSAPL1Q6NUJ1 521 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 APCDD1Q8J025 514 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 LMNTD1Q8N9Z9 388 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 BHLHE22Q8NFJ8 381 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 WFDC5Q8TCV5 224 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 JPH3Q8WXH2 748 aaPredicted RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 PYCR2Q96C36 320 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 LINGO1Q96FE5 620 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 CDKN2AIPNLQ96HQ2 116 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 GPR22Q99680 433 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 RAD21L1Q9H4I0 556 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 IGFLR1Q9H665 355 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 MRPL40Q9NQ50 206 aaKnown RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 MRPL17Q9NRX2 175 aaKnown RBP12.14□□□□□ -0.47
USP11-206ENST00000469080 OXSMQ9NWU1 459 aa12.14□□□□□ -0.47
USP11-206ENST00000469080 C7orf72A4D263 438 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 A8MT66 165 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 TGDSO95455 350 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 CYP11A1P05108 521 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 MLLT10P55197 1068 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 COX10Q12887 443 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 VPS26BQ4G0F5 336 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PPP4R4Q6NUP7 873 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 RANBP10Q6VN20 620 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PLEKHG7Q6ZR37 379 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 CHERPQ8IWX8 916 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 GALNT12Q8IXK2 581 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 TP53I13Q8NBR0 393 aaPredicted RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 LRRC20Q8TCA0 184 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 PIK3R3Q92569 461 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 CCDC106Q9BWC9 280 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 TDRD1Q9BXT4 1180 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 TNFRSF12AQ9NP84 129 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 EIF2B3Q9NR50 452 aaKnown RBP12.13□□□□□ -0.47
USP11-206ENST00000469080 TEKT2Q9UIF3 430 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 ZNF221Q9UK13 617 aa12.13□□□□□ -0.47
USP11-206ENST00000469080 FAM149AA5PLN7 773 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms