RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 ZNF366Q8N895 744 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 TMEM125Q96AQ2 219 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 RHBDF1Q96CC6 855 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 FAM126AQ9BYI3 521 aaPredicted RBP14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 BRD9Q9H8M2 597 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 WWOXQ9NZC7 414 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 BCAP29Q9UHQ4 241 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 PCDHA9Q9Y5H5 950 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 SNX13Q9Y5W8 968 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 AP4B1Q9Y6B7 739 aa14.9□□□□□ -0.02
SCAMP4-202ENST00000409472 ZFC3H1O60293 1989 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 C15orf38-AP3S2A0A0A6YYH1 394 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 ARHGEF15O94989 841 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 S100BP04271 92 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 RHOP08100 348 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 NCK1P16333 377 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 EPCAMP16422 314 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 DGKAP23743 735 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 VARSP26640 1264 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 RGS4P49798 205 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 KCNK10P57789 538 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 PLIN5Q00G26 463 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 HMGCS1Q01581 520 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 TRAP1Q12931 704 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 ATP6AP1LQ52LC2 224 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 CARD16Q5EG05 197 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 USP45Q70EL2 814 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 ARPINQ7Z6K5 226 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 MINDY1Q8N5J2 469 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 ST13P5Q8NFI4 369 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 OR2A12Q8NGT7 310 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 SCAMP4Q969E2 229 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 ABHD8Q96I13 439 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 BEGAINQ9BUH8 593 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 PIF1Q9H611 641 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 RNF11Q9Y3C5 154 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 CAPNS1P04632 268 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 CDK4P11802 303 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 ZNF26P17031 533 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 GALK1P51570 392 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 POLR2JP52435 117 aaKnown RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 DGKQP52824 942 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 GSTM4Q03013 218 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 PTGR1Q14914 329 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 ZNF648Q5T619 568 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 CBARPQ8N350 705 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 GAB3Q8WWW8 586 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 PBXIP1Q96AQ6 731 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 BTBD9Q96Q07 612 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 IL23AQ9NPF7 189 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 FAIMQ9NVQ4 179 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 TUBA8Q9NY65 449 aaPredicted RBP14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 CCL27Q9Y4X3 112 aa14.89□□□□□ -0.03
SCAMP4-202ENST00000409472 C7orf72A4D263 438 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 CCDC154A6NI56 674 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 TTC34A8MYJ7 566 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 GRM6O15303 877 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 EFCAB14O75071 495 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 EEDO75530 441 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 EPORP19235 508 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 CTNNB1P35222 781 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 SELPLGQ14242 412 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 MAP7D1Q3KQU3 841 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 GPR33Q49SQ1 333 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 PDCD4Q53EL6 469 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 SGO1Q5FBB7 561 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 CROCCP3Q8IVE0 287 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 GPR65Q8IYL9 337 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 ADCY4Q8NFM4 1077 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 OR2T34Q8NGX1 318 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 OR2T3Q8NH03 318 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 FNDC8Q8TC99 324 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 IRF7Q92985 503 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 CNBD2Q96M20 576 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 SLC29A1Q99808 456 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 COQ10BQ9H8M1 238 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 TDP1Q9NUW8 608 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 FAM8A1Q9UBU6 413 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 SLC25A13Q9UJS0 675 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 A0A1B0GTW7 788 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 ARHGAP10A1A4S6 786 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 FAM149AA5PLN7 773 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 TMEM247A6NEH6 219 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 ANKRD28O15084 1053 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 ARPC2O15144 300 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 TPST1O60507 370 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 CKMT2P17540 419 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 HOXD12P35452 270 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 RPL5P46777 297 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 GSK3BP49841 420 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 RPL38P63173 70 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 MESP2Q0VG99 397 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 ARHGEF7Q14155 803 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 HSD11B1LQ7Z5J1 315 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 MILR1Q7Z6M3 343 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 BEND7Q8N7W2 519 aaPredicted RBP14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 MRPL43Q8N983 215 aaKnown RBP14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 POF1BQ8WVV4 589 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 COPS8Q99627 209 aa14.88□□□□□ -0.03
SCAMP4-202ENST00000409472 CIB1Q99828 191 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms