RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 HOPXQ9BPY8 73 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 TRIT1Q9H3H1 467 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 CAPN10Q9HC96 672 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ATP6V1HQ9UI12 483 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TMED5Q9Y3A6 229 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 KIAA1217Q5T5P2 1943 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 A0A096LPI6 279 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ILVBLA1L0T0 632 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 BTN3A3O00478 584 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 FAM189A1O60320 539 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 SCO1O75880 301 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 GSRP00390 522 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 GBAP04062 536 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TSPAN19P0C672 248 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ITPKAP23677 461 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 EDNRBP24530 442 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 C21orf33P30042 268 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 CYP2C18P33260 490 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 S100A3P33764 101 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 CD68P34810 354 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 RFC2P35250 354 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 HNF4AP41235 474 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 CRATP43155 626 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 PTPN5P54829 565 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TXNL4AP83876 142 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 ILF2Q12905 390 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 GRIK4Q16099 956 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 UGT8Q16880 541 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 CES5AQ6NT32 575 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 VTCN1Q7Z7D3 282 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ZDHHC21Q8IVQ6 265 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 C2orf73Q8N5S3 287 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 WDR36Q8NI36 951 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 STAG3L4Q8TBR4 150 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.68□□□□□ -1.026e-7■□□□□ 11.1
RTN4-206ENST00000394611 RELTQ969Z4 430 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 MED8Q96G25 268 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 BIRC8Q96P09 236 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ALPK1Q96QP1 1244 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 PANX1Q96RD7 426 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 RANBP9Q96S59 729 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 CDK5RAP1Q96SZ6 601 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 APOL4Q9BPW4 351 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 SP140LQ9H930 580 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 C11orf16Q9NQ32 467 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 PAK1IP1Q9NWT1 392 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 YARS2Q9Y2Z4 477 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 MEIS3P2A8K0S8 358 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 B3GALT4O96024 378 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 GLUD1P00367 558 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 CKMT1AP12532 417 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 SLC26A3P40879 764 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 GRM5P41594 1212 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ALDH6A1Q02252 535 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 SF1Q15637 639 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 CRY1Q16526 586 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 PRMT9Q6P2P2 845 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TIFABQ6ZNK6 161 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 KRT74Q7RTS7 529 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ZNF605Q86T29 641 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 OR56A4Q8NGH8 313 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 SLC35F5Q8WV83 523 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 LGALS12Q96DT0 336 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 CCDC120Q96HB5 630 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 ZNF347Q96SE7 839 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 HNRNPABQ99729 332 aaKnown RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 PLSCR3Q9NRY6 295 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TUBA8Q9NY65 449 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 ZNF224Q9NZL3 707 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 TRHDEQ9UKU6 1024 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 KIAA1257Q9ULG3 409 aa8.68□□□□□ -1.02
RTN4-206ENST00000394611 MAFBQ9Y5Q3 323 aaPredicted RBP8.68□□□□□ -1.02
RTN4-206ENST00000394611 ALPK2Q86TB3 2170 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 A0A1B0GTL3 188 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 H0YC42 278 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SMLR1H3BR10 107 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 PMM2O15305 246 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SERPINI2O75830 405 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 MBL2P11226 248 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 CTSKP43235 329 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 RFX3P48380 749 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 LRP8Q14114 963 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ZNF267Q14586 743 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 ZNF362Q5T0B9 420 aaPredicted RBP8.67□□□□□ -1.02
RTN4-206ENST00000394611 MFSD14CQ5VZR4 134 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 B3GNT9Q6UX72 402 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 FAM151BQ6UXP7 276 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 KIAA0408Q6ZU52 694 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 CACUL1Q86Y37 369 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 ADGRG5Q8IZF4 528 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SPARTQ8N0X7 666 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 DTWD1Q8N5C7 304 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 C19orf18Q8NEA5 215 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 OR9Q1Q8NGQ5 310 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 RAET1EQ8TD07 263 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 SELENOMQ8WWX9 145 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 RSPH1Q8WYR4 309 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 KAT2AQ92830 837 aa8.67□□□□□ -1.02
RTN4-206ENST00000394611 PCED1BQ96HM7 432 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms