RNA–Protein interactions for RNA: ENST00000389416.8

PTPRN2-202, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRN2, Length 4,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-202ENST00000389416 STX4Q12846 297 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 ZNF648Q5T619 568 aaPredicted RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 KLHDC10Q6PID8 442 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 SPESP1Q6UW49 350 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 ANKRD33Q7Z3H0 272 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 TMEM135Q86UB9 458 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 LIX1Q8N485 282 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 TXNDC5Q8NBS9 432 aaKnown RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 NECTIN4Q96NY8 510 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 MIPEPQ99797 713 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 KLF16Q9BXK1 252 aaPredicted RBP12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 ITM2CQ9NQX7 267 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 NFS1Q9Y697 457 aa12.88□□□□□ -0.35
PTPRN2-202ENST00000389416 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 FAM47E-STBD1D6RA91 191 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 UMPSP11172 480 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SRCP12931 536 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 ARSAP15289 507 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 ASMTP46597 345 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 MRPS35P82673 323 aaKnown RBP12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 PTCHD3Q3KNS1 767 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 ATP13A5Q4VNC0 1218 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 PSAPL1Q6NUJ1 521 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 MAGEE2Q8TD90 523 aaPredicted RBP12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 AGAP11Q8TF27 550 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SEC14L1Q92503 715 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 RTKNQ9BST9 563 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 DOCK2Q92608 1830 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 GNSP15586 552 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC6A2P23975 617 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 GMPRP36959 345 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 CCNFP41002 786 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 AP1S2P56377 157 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC18A2Q05940 514 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC9B1Q4ZJI4 515 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 TSPAN33Q86UF1 283 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SHKBP1Q8TBC3 707 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 KCNJ9Q92806 393 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC22A12Q96S37 553 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 BRINP2Q9C0B6 783 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 ANGPT4Q9Y264 503 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 PLK4O00444 970 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 GSC2O15499 205 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SHOX2O60902 331 aaPredicted RBP12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 TGFB1P01137 390 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 TNK2Q07912 1038 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 SLBPQ14493 270 aaKnown RBP eCLIP12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 GATAD2AQ86YP4 633 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 ADHFE1Q8IWW8 467 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 TTLL2Q9BWV7 592 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 OSBPL7Q9BZF2 842 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 CYP8B1Q9UNU6 501 aa12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 POLR2AP24928 1970 aaKnown RBP12.87□□□□□ -0.35
PTPRN2-202ENST00000389416 COL24A1Q17RW2 1714 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 KIAA1551Q9HCM1 1747 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 COPZ1P61923 177 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 LAPTM5Q13571 262 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 RANBP10Q6VN20 620 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 NET1Q7Z628 596 aaPredicted RBP12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 HEATR4Q86WZ0 1026 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 RELL1Q8IUW5 271 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 GLMNQ92990 594 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 TADA1Q96BN2 335 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 LRIG1Q96JA1 1093 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 MRPS30Q9NP92 439 aaKnown RBP12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 NFKB2Q00653 900 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 FAM174BQ3ZCQ3 159 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 PLD3Q8IV08 490 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 DHRSXQ8N5I4 330 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 C9orf16Q9BUW7 83 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 KLHL25Q9H0H3 589 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC32A1Q9H598 525 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 RPS6KA6Q9UK32 745 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 CA14Q9ULX7 337 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 PRPF19Q9UMS4 504 aaKnown RBP12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 DHRS12A0PJE2 317 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC28A2O43868 658 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 RFPL1O75677 317 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 ADH1BP00325 375 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 GSRP00390 522 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 ENO2P09104 434 aaPredicted RBP12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 GTF2E2P29084 291 aaKnown RBP12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 GGT5P36269 586 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 BUD31P41223 144 aaPredicted RBP12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 TRPC1P48995 793 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 NEK2P51955 445 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 TOMM20Q15388 145 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 GSTA3Q16772 222 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 SLC43A3Q8NBI5 491 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 GLYATL1Q969I3 302 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 NDEL1Q9GZM8 345 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 C3orf14Q9HBI5 128 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 MRM3Q9HC36 420 aaKnown RBP12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 TAC3Q9UHF0 121 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 A0A1W2PQU0 124 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 TCRBV21S2A2A0A5A6 115 aa12.86□□□□□ -0.35
PTPRN2-202ENST00000389416 MAGEA13PA6NCF6 341 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms