RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TBC1D3CQ6IPX1 549 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TBC1D3Q8IZP1 549 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TUBGCP5Q96RT8 1024 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 MRM3Q9HC36 420 aaKnown RBP16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 GALPQ9UBC7 116 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 NUP188Q5SRE5 1749 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 BHMG1C9JSJ3 638 aaPredicted RBP16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 HLA-DQA2P01906 255 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 RNF44Q7L0R7 432 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF554Q86TJ5 538 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 WDTC1Q8N5D0 677 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 KLHL23Q8NBE8 558 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TRPV3Q8NET8 790 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 DUSP26Q9BV47 211 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 RACGAP1Q9H0H5 632 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 ACTR3BQ9P1U1 418 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 MYH11P35749 1972 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TMEM233B4DJY2 109 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 HNMTP50135 292 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 GRB14Q14449 540 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 SNAPC1Q16533 368 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TMEM220Q6QAJ8 160 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 KRT74Q7RTS7 529 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 CAPSLQ8WWF8 208 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 COX4I2Q96KJ9 171 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 TPK1Q9H3S4 243 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 CD84Q9UIB8 345 aa16.81■□□□□ 0.28
TRAPPC11-201ENST00000334690 CASKO14936 926 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ARPC2O15144 300 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 HCRTO43612 131 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 FAM189A1O60320 539 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 C8AP07357 584 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 LAMP2P13473 410 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 PTPN2P17706 415 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 KLHL35Q6PF15 583 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF730Q6ZMV8 503 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CYP2U1Q7Z449 544 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 COMMD2Q86X83 199 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 MYOCQ99972 504 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 EBPLQ9BY08 206 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 PCBD2Q9H0N5 130 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZDHHC3Q9NYG2 299 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 OAZ3Q9UMX2 235 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 MYH6P13533 1939 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ANKRD66B4E2M5 251 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CCL16O15467 120 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CDH12P55289 794 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CAP1Q01518 475 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZBTB6Q15916 424 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 PLET1Q6UQ28 207 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ENDOVQ8N8Q3 282 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 FCGR1BQ92637 280 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 KIAA1191Q96A73 305 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 EXOSC8Q96B26 276 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 KAT8Q9H7Z6 458 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CRTAC1Q9NQ79 661 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ERVW-1Q9UQF0 538 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 WBP11Q9Y2W2 641 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF142P52746 1687 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 RGPD1P0DJD0 1748 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 A0A1W2PP18 115 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 hCG_2039718K7EN88 272 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 BCAS2O75934 225 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 PRKAR1AP10644 381 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 IVDP26440 423 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 GSK3BP49841 420 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 LARS2Q15031 903 aaKnown RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CNPY1Q3B7I2 92 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 EGFLAMQ63HQ2 1017 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ANO7Q6IWH7 933 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 TMPRSS11AQ6ZMR5 421 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CILP2Q8IUL8 1156 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 OR52J3Q8NH60 311 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 PRICKLE1Q96MT3 831 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZNF347Q96SE7 839 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 SUV39H2Q9H5I1 410 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 SCN11AQ9UI33 1791 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 AIREO43918 545 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 RGS20O76081 388 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 EPHX1P07099 455 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 STC1P52823 247 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 RGS8P57771 180 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 DNAJB7Q7Z6W7 309 aaPredicted RBP16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 OR10G6Q8NH81 332 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 MIPEPQ99797 713 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 GKN1Q9NS71 199 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 ZSCAN32Q9NX65 697 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 CALML5Q9NZT1 146 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 MSRAQ9UJ68 235 aa16.8■□□□□ 0.28
TRAPPC11-201ENST00000334690 H3BNH8 94 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 STX16-NPEPL1H3BU86 382 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CHST10O43529 356 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 IDH3BO43837 385 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 APODP05090 189 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 FGF3P11487 239 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 ANXA8P13928 327 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 VARSP26640 1264 aaKnown RBP16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 ACVRL1P37023 503 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 CSKP41240 450 aa16.79■□□□□ 0.28
TRAPPC11-201ENST00000334690 RAB15P59190 212 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms