RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 NOP9Q86U38 636 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 AMZ2Q86W34 360 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 SPPL2CQ8IUH8 684 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 ZNF547Q8IVP9 402 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 EID3Q8N140 333 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 TAB3Q8N5C8 712 aaPredicted RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 SLC30A5Q8TAD4 765 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 CCDC110Q8TBZ0 833 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 GLYATL1Q969I3 302 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 TTC25Q96NG3 672 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 ALPK1Q96QP1 1244 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 EIF3CQ99613 913 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 ZSCAN5AQ9BUG6 496 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 DHX35Q9H5Z1 703 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 SLC24A3Q9HC58 644 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 SEPT11Q9NVA2 429 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 DNAJB12Q9NXW2 375 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 PLA2G3Q9NZ20 509 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 KCNN3Q9UGI6 736 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 ST6GALNAC2Q9UJ37 374 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 HOOK1Q9UJC3 728 aaKnown RBP10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 POMT2Q9UKY4 750 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 AP4E1Q9UPM8 1137 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 CTNND2Q9UQB3 1225 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 CHKBQ9Y259 395 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 ATRQ13535 2644 aa10.64□□□□□ -0.71
PTP4A1-207ENST00000639568 GTPBP10A4D1E9 387 aaKnown RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 HEXAP06865 529 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 INHBBP09529 407 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 MTHFD1P11586 935 aaKnown RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 UNGP13051 313 aaPredicted RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 KRT33BQ14525 404 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 MRPL14Q6P1L8 145 aaKnown RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 NCCRP1Q6ZVX7 275 aaPredicted RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 LPCAT1Q8NF37 534 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 OR4E2Q8NGC2 313 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 GDAP1Q8TB36 358 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 ARSGQ96EG1 525 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 MRM3Q9HC36 420 aaKnown RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 NT5MQ9NPB1 228 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 IRAK4Q9NWZ3 460 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 STMN3Q9NZ72 180 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 DTLQ9NZJ0 730 aa10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 MRPS2Q9Y399 296 aaKnown RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 CFAP20Q9Y6A4 193 aaKnown RBP10.63□□□□□ -0.71
PTP4A1-207ENST00000639568 FAM227AF5H4B4 570 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 SOCS6O14544 535 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 CNOT3O75175 753 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 USP1O94782 785 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 SLCO2B1O94956 709 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 PEX11BO96011 259 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 PYGMP11217 842 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 ST6GAL1P15907 406 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 CDH6P55285 790 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 RPL26P61254 145 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 KRT85P78386 507 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 RBBP7Q16576 425 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 KRTCAP3Q53RY4 240 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 PPP6R3Q5H9R7 873 aaPredicted RBP10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 PDPK2PQ6A1A2 396 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 KIRREL2Q6UWL6 708 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 CDHR3Q6ZTQ4 885 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 HOOK3Q86VS8 718 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 ATPAF2Q8N5M1 289 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 TRAM1L1Q8N609 369 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 PHF10Q8WUB8 498 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 SLC20A1Q8WUM9 679 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 HAS2Q92819 552 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 LYSMD1Q96S90 227 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 CNPY3Q9BT09 278 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 NUP85Q9BW27 656 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 POLR1EQ9GZS1 481 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 KLHL25Q9H0H3 589 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 SIX2Q9NPC8 291 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 RAD18Q9NS91 495 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 ADAM22Q9P0K1 906 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 PTGFRNQ9P2B2 879 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 DHCR7Q9UBM7 475 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 SLC24A2Q9UI40 661 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 PPT2Q9UMR5 302 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 RPL26L1Q9UNX3 145 aaKnown RBP10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 HS3ST3B1Q9Y662 390 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 CNTRLQ7Z7A1 2325 aa10.62□□□□□ -0.71
PTP4A1-207ENST00000639568 SIGLEC16A6NMB1 481 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 ZSCAN9O15535 394 aaPredicted RBP10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 MAFKO60675 156 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 F10P00742 488 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 ABOP16442 354 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 IGFBP2P18065 325 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 ITGAXP20702 1163 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 ALAS2P22557 587 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 CES1P23141 567 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 PCSK6P29122 969 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 PRDX3P30048 256 aaKnown RBP10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 NSFP46459 744 aaKnown RBP10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 TMEM115Q12893 351 aaPredicted RBP10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 ERMARDQ5T6L9 678 aa10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 Q6ZPB1 254 aaPredicted RBP10.61□□□□□ -0.71
PTP4A1-207ENST00000639568 C11orf96Q7Z7L8 435 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms