RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 NDRG3Q9UGV2 375 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 MTUS1Q9ULD2 1270 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 GTF2A1LQ9UNN4 478 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 GINS2Q9Y248 185 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 CRYL1Q9Y2S2 319 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 KIF3AQ9Y496 699 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 VWA8A3KMH1 1905 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZNF318Q5VUA4 2279 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 DOCK8Q8NF50 2099 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 ANK1P16157 1881 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 PLXNA3P51805 1871 aa3.69□□□□□ -1.82
CKS1BP3-201ENST00000600888 DOCK6Q96HP0 2047 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TCHHQ07283 1943 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 C5orf42Q9H799 3197 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 IGHV4-28A0A0C4DH34 117 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 A0A1B0GVM2 712 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM150BA6NC51 233 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 LACTBL1A8MY62 500 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 LAD1O00515 517 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 ATP2C2O75185 946 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 ACAA1P09110 424 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 OR52Z1P0C646 297 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CBSLP0DN79 551 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TFPIP10646 304 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 DNAJB1P25685 340 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 AXLP30530 894 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CTNNB1P35222 781 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CBSP35520 551 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 ARL2P36404 184 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 PRPHP41219 470 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 AMTP48728 403 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 NR1H2P55055 460 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 PTENP60484 403 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 UFM1P61960 85 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 RPP30P78346 268 aaKnown RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 EGR4Q05215 589 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 LTBQ06643 244 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 KRTAP1-1Q07627 177 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 LAMTOR4Q0VGL1 99 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 GALNT2Q10471 571 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 RUNX2Q13950 521 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 KCNC3Q14003 757 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CTTNQ14247 550 aaKnown RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 EMC2Q15006 297 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 SHBQ15464 509 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 XKR9Q5GH70 373 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TCEAL5Q5H9L2 206 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLLU1OSQ5K130 101 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 PLA2G4FQ68DD2 849 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CES5AQ6NT32 575 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM81Q6P7N7 255 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM184AQ6ZMB5 413 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TRMT1LQ7Z2T5 733 aaKnown RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 GPAT4Q86UL3 456 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CATSPER3Q86XQ3 398 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 LRRC43Q8N309 656 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 C4orf32Q8N8J7 132 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 FAM184AQ8NB25 1140 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 COLGALT1Q8NBJ5 622 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 NEXN-AS1Q8NBZ9 246 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 C11orf65Q8NCR3 313 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CNNM3Q8NE01 707 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 OR14A16Q8NHC5 309 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 MRPS27Q92552 414 aaKnown RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 NEUROG1Q92886 237 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 PHF21BQ96EK2 531 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 RNF125Q96EQ8 232 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CCDC51Q96ER9 411 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CDCA3Q99618 268 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 POLR3CQ9BUI4 534 aaPredicted RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 MRPL9Q9BYD2 267 aaKnown RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 UPF2Q9HAU5 1272 aaKnown RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLK4Q9HAZ1 481 aaKnown RBP3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 XPNPEP1Q9NQW7 623 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 AGPAT5Q9NUQ2 364 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TMEM51Q9NW97 253 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 PPP1R14DQ9NXH3 145 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 KIAA1456Q9P272 454 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 STK39Q9UEW8 545 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 CNTNAP2Q9UHC6 1331 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 TECTAO75443 2155 aa3.68□□□□□ -1.82
CKS1BP3-201ENST00000600888 A0A1B0GUA9 196 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HSPB2A8KAH6 182 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TSPAN4O14817 238 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 MBTPS2O43462 519 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 SLC28A2O43868 658 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 TACC1O75410 805 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 MED24O75448 989 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 GALTP07902 379 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 PCNAP12004 261 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 COX7A2P14406 83 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 ITGB6P18564 788 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 CYP11B2P19099 503 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 GLRA2P23416 452 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 FMO4P31512 558 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 GGT5P36269 586 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 CLDN2P57739 230 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 ZXDBP98169 803 aa3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 NCBP1Q09161 790 aaKnown RBP3.67□□□□□ -1.82
CKS1BP3-201ENST00000600888 HYAL1Q12794 435 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms